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hypothetical_protein_pneo_cds_901
Euk-VirPandoravirus_neocaledonia
hypothetical_protein_pneo_cds_901__YP_009482511__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482511 ↗
- Protein ID:
- hypothetical_protein_pneo_cds_901
- Kingdom:
- euk
Quality
50.4
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 251-323
D2
high
residues 409-503
Domain cluster:
rep: hypothetical_protein_TW95_gp1137__YP_009120106__Pandoravirus_inopinatum__1605721__D229-297
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19178.6 best | DUF5860 | 118.2 | 5.20e-34 | 100.0% | 56.9% |
D3
high
residues 513-609
Domain cluster:
rep: hypothetical_protein_TW95_gp1137__YP_009120106__Pandoravirus_inopinatum__1605721__D229-297
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19178.6 best | DUF5860 | 67.7 | 1.80e-18 | 62.9% | 35.9% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d53A00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.63 | 53.0 | 4.79e-01 | 91.8% | 96.2% |
| 2qdfA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.62 | 33.0 | 3.60e-01 | 85.6% | 60.2% |
| 1vkwA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.60 | 43.0 | 4.01e-01 | 74.2% | 85.1% |
| 1kvdB00 | 3.30.44.10 | Alpha Beta › 2-Layer Sandwich › Smk Toxin, Beta chain › Smk Toxin, beta chain | 0.57 | 32.0 | 3.57e-01 | 93.8% | 68.8% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.56 | 46.0 | 4.11e-01 | 100.0% | 62.1% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.55 | 48.0 | 4.30e-01 | 97.9% | 75.7% |
| 6g4gD01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.55 | 44.0 | 3.36e-01 | 90.7% | 90.2% |
| 4d70A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.54 | 48.0 | 4.10e-01 | 100.0% | 66.9% |
| 2f9aA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 42.0 | 2.92e-01 | 95.9% | 79.7% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3499933 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.71 | 59.0 | 5.40e-01 | 91.8% | 97.7% |
| 3466869 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.66 | 55.0 | 4.43e-01 | 89.7% | 86.5% |
| 4145191 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.57 | 47.0 | 3.16e-01 | 90.7% | 93.9% |
| 3998860 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.57 | 49.0 | 3.99e-01 | 97.9% | 83.7% |
| 3638648 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.55 | 41.0 | 3.79e-01 | 85.6% | 61.6% |
| 4945650 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.54 | 34.0 | 3.44e-01 | 87.6% | 62.0% |
| 3284389 | 7581.1.1.0 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like | 0.53 | 41.0 | 2.94e-01 | 86.6% | 72.8% |
| 4266342 | 7581.1.1.29 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ACP_syn_III_C, ACP_syn_III | 0.53 | 41.0 | 2.97e-01 | 85.6% | 63.5% |
| 3282479 | 7581.1.1.20 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_N+Chal_sti_synt_C | 0.52 | 43.0 | 3.01e-01 | 94.8% | 96.7% |
| 3823993 | 7581.1.1.25 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › FAE1_CUT1_RppA, ACP_syn_III_C | 0.51 | 44.0 | 2.92e-01 | 100.0% | 80.0% |
| 3729338 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.50 | 44.0 | 2.80e-01 | 100.0% | 98.3% |
| 4935959 | 7581.1.1.11 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › HMG_CoA_synt_C | 0.50 | 35.0 | 2.68e-01 | 73.2% | 76.7% |