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hypothetical_protein_pneo_cds_918
Euk-VirPandoravirus_neocaledonia
hypothetical_protein_pneo_cds_918__YP_009482528__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482528 ↗
- Protein ID:
- hypothetical_protein_pneo_cds_918
- Kingdom:
- euk
Quality
71.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-58
D2
medium
residues 253-346
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gmfA02 | 1.10.40.110 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › | 0.64 | 38.0 | 3.69e-01 | 95.7% | 53.4% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 36.0 | 3.62e-01 | 89.4% | 58.6% |
| 1u00A02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 37.0 | 3.74e-01 | 76.6% | 86.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3409567 | 3755.3.1.324 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725 | 0.64 | 30.0 | 2.44e-01 | 71.3% | 26.1% |
| 3937960 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.53 | 35.0 | 3.65e-01 | 94.7% | 74.1% |
| 3489683 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.53 | 33.0 | 3.67e-01 | 91.5% | 80.0% |
| 3260953 | 3324.1.1.2 ↗ | extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases | 0.52 | 36.0 | 3.26e-01 | 71.3% | 73.6% |
| 3968813 | 5076.2.1.7 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › UPF0259 | 0.52 | 38.0 | 3.00e-01 | 78.7% | 98.6% |
| 3970238 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.50 | 36.0 | 3.03e-01 | 79.8% | 41.1% |