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hypothetical_protein_pneo_cds_9

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_9__YP_009481619__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009481619 ↗
Protein ID:
hypothetical_protein_pneo_cds_9
Kingdom:
euk

Quality

66.9 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 84-257
PDB
Domain cluster: rep: F-box_domain_containing_protein__YP_009480767__Pandoravirus_macleodensis__2107707__D109-271
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1elwA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 35.0 4.14e-01 86.8% 86.3%
1iygA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 37.0 4.19e-01 86.8% 83.5%
1a17A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 35.0 3.70e-01 87.9% 66.0%
2olpA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 37.0 4.00e-01 71.8% 88.7%
3rauA00 1.25.40.280 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains 0.53 43.0 3.43e-01 87.4% 76.8%
2ff4A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 39.0 3.85e-01 87.4% 73.1%
3csvA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.52 42.0 3.83e-01 87.4% 94.6%
3k3uA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 38.0 4.26e-01 76.4% 98.5%
1ihgA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 35.0 3.77e-01 85.1% 82.1%
1elrA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 33.0 3.72e-01 93.7% 86.7%
1x9fC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 37.0 3.96e-01 74.7% 89.3%
2d2mD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 37.0 3.99e-01 74.7% 90.3%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.50 29.0 3.58e-01 71.3% 92.2%
3wctD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.50 37.0 4.01e-01 76.4% 90.5%
5a72A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.50 31.0 3.32e-01 83.9% 68.2%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3497611 109.3.1.130 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › TRPM2 0.60 52.0 4.23e-01 94.8% 75.0%
3789965 109.3.1.167 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ion_trans, TRPM2 0.59 52.0 3.50e-01 94.3% 89.1%
3273703 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 45.0 3.98e-01 88.5% 53.5%
3758111 109.7.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E 0.57 30.0 4.01e-01 77.0% 100.0%
5038333 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 34.0 3.96e-01 88.5% 85.8%
4378003 109.4.1.362 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1,TPR_8 0.56 34.0 3.58e-01 86.2% 64.4%
3519832 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.56 49.0 3.60e-01 96.0% 43.4%
3830808 109.4.1.1287 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_8, TPR_16 0.55 37.0 3.03e-01 90.8% 33.4%
3699647 109.4.1.1864 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_BSK1_C 0.55 35.0 4.04e-01 87.9% 90.8%
3343868 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 39.0 3.91e-01 92.5% 69.2%
3023263 109.4.1.200 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14 0.54 29.0 3.51e-01 85.6% 79.4%
4589822 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 29.0 3.54e-01 86.2% 84.8%
3298 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.52 37.0 3.99e-01 71.3% 89.7%
3379416 109.4.1.1130 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_BSK1_C 0.52 32.0 3.26e-01 87.4% 58.9%
3643377 109.4.1.1156 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif 0.52 32.0 3.68e-01 86.8% 85.4%
3433976 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.51 45.0 3.50e-01 93.7% 50.0%
3733427 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.51 44.0 3.28e-01 93.7% 42.9%
3644047 109.4.1.1130 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_BSK1_C 0.51 33.0 3.44e-01 87.9% 70.3%
4426218 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 42.0 3.00e-01 90.8% 61.5%
3648386 109.4.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.50 34.0 3.46e-01 87.4% 69.4%
D2 medium residues 258-280_298-411
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_980__YP_009483671__Pandoravirus_quercus__2107709__D223-410