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hypothetical_protein_pqer_cds_1003
Euk-VirPandoravirus_quercus
hypothetical_protein_pqer_cds_1003__YP_009483694__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009483694 ↗
- Protein ID:
- hypothetical_protein_pqer_cds_1003
- Kingdom:
- euk
Quality
75.9
mean pLDDT
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 246-352
Domain cluster:
rep: hypothetical_protein_PBCV1_A267L__NP_048621__Paramecium_bursaria_Chlorella_virus_1__10506__D18-124
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.81 | 66.0 | 5.95e-01 | 86.0% | 85.2% |
| 1jeqA05 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.55 | 22.0 | 3.09e-01 | 73.8% | 74.5% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 119462 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.81 | 66.0 | 5.93e-01 | 86.0% | 85.2% |
| 3397473 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.79 | 57.0 | 5.47e-01 | 73.8% | 75.8% |
| 4979945 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.77 | 62.0 | 5.89e-01 | 85.0% | 92.0% |
| 3561303 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.76 | 56.0 | 4.80e-01 | 76.6% | 57.0% |
| 1144783 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.68 | 51.0 | 4.39e-01 | 82.2% | 51.9% |
| 5019258 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.68 | 47.0 | 5.35e-01 | 71.0% | 98.8% |
| 3590055 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.65 | 51.0 | 5.03e-01 | 83.2% | 99.1% |
| 3307439 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.64 | 44.0 | 4.20e-01 | 70.1% | 74.6% |
| 2991844 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.64 | 47.0 | 4.72e-01 | 79.4% | 75.2% |
| 5080395 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.60 | 43.0 | 4.19e-01 | 72.9% | 95.7% |
| 4187709 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.60 | 47.0 | 3.10e-01 | 83.2% | 21.7% |
| 3587782 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.58 | 48.0 | 4.84e-01 | 89.7% | 99.1% |
| 4949870 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 38.0 | 3.08e-01 | 77.6% | 79.1% |
| 3442153 | 376.1.3.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H | 0.51 | 32.0 | 3.75e-01 | 75.7% | 90.7% |
D2
medium
residues 99-143
Domain cluster:
representative
D3
medium
residues 146-225
Domain cluster:
rep: S16_GE16_scaffold_10741_prodigal-single.1__X__X__00184__D140-212