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hypothetical_protein_pqer_cds_1007

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_1007__YP_009483698__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483698 ↗
Protein ID:
hypothetical_protein_pqer_cds_1007
Kingdom:
euk

Quality

72.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-79_172-245_283-313
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp0236__YP_009119205__Pandoravirus_inopinatum__1605721__D3-199
D2 medium residues 80-171_246-282
PDB
D3 medium residues 347-368_498-559_599-651
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp1718__YP_009120687__Pandoravirus_inopinatum__1605721__D170-219_240-288
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yksA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.64 40.0 4.32e-01 74.5% 73.5%
2fu2A00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.61 31.0 4.12e-01 78.8% 87.2%
5l0wB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 37.0 3.71e-01 89.1% 59.4%
4flbA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 43.0 4.38e-01 91.2% 75.6%
2jqqA00 1.20.58.1240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 47.0 4.55e-01 91.2% 74.0%
3hl6A02 1.20.58.700 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 31.0 3.36e-01 70.1% 59.1%
7dvqK01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 39.0 3.59e-01 87.6% 54.9%
1kt1A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 34.0 3.32e-01 89.8% 53.8%
1yo7A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.54 40.0 4.21e-01 85.4% 87.5%
8el7B01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.53 44.0 3.21e-01 87.6% 36.3%
1rcwB00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.52 42.0 3.63e-01 85.4% 90.2%
3l6xA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 44.0 3.09e-01 93.4% 29.6%
3tt9A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 41.0 3.42e-01 88.3% 50.2%
4wz9A04 1.25.50.20 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › 0.51 37.0 2.86e-01 92.0% 32.2%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3830990 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 53.0 4.24e-01 97.1% 70.9%
3571190 109.25.1.7 ↗ alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › PF26588 0.58 43.0 4.66e-01 87.6% 92.2%
4026204 192.10.1.0 ↗ alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain 0.57 38.0 4.27e-01 89.1% 87.6%
3824456 109.4.1.1665 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30377 0.56 47.0 3.59e-01 89.1% 43.5%
3461381 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 41.0 4.14e-01 86.9% 75.0%
3205408 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 46.0 2.81e-01 89.1% 16.9%
3710394 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 49.0 3.99e-01 94.2% 77.1%
3382127 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 48.0 3.37e-01 93.4% 42.4%
3709459 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.55 38.0 3.23e-01 70.1% 95.9%
3591204 109.4.1.1341 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG3_N, COG3_C 0.55 47.0 3.06e-01 92.0% 32.2%
3717908 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 49.0 3.14e-01 96.4% 23.3%
4134971 603.1.1.225 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE, PF26585 0.54 41.0 3.70e-01 78.1% 68.6%
3789146 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.54 46.0 2.96e-01 89.8% 24.6%
4016304 5000.4.1.0 ↗ alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain 0.54 45.0 3.71e-01 90.5% 60.0%
3411820 109.4.1.583 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DNA_pol_phi 0.53 39.0 3.39e-01 78.8% 49.0%
4254111 633.13.1.1 ↗ alpha bundles › Bromodomain-like › DsbB-like › DsbB-like › DsbB 0.53 45.0 4.43e-01 90.5% 86.9%
3721642 3327.1.1.1 ↗ alpha bundles › HET-S N-terminal domain › HET-S N-terminal domain › HET-S N-terminal domain › HeLo 0.52 40.0 3.60e-01 80.3% 88.4%
3608548 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 47.0 3.63e-01 97.1% 52.9%
3772926 611.3.1.13 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › PF26718 0.52 34.0 3.57e-01 80.3% 72.8%
4480624 601.50.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Flagellar cap protein FliD helical bundle domain › Flagellar cap protein FliD helical bundle domain 0.52 36.0 3.60e-01 70.8% 72.1%
3646869 5059.1.1.1 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.51 39.0 2.90e-01 78.8% 95.6%
3786600 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 42.0 3.30e-01 91.2% 46.3%
4324539 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.50 38.0 3.13e-01 78.1% 72.9%
D4 medium residues 369-497_560-598
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_1004__YP_009483695__Pandoravirus_quercus__2107709__D48-172_234-274