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hypothetical_protein_pqer_cds_1018

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_1018__YP_009483709__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483709 ↗
Protein ID:
hypothetical_protein_pqer_cds_1018
Kingdom:
euk

Quality

72.0 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-149
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_452__YP_009483143__Pandoravirus_quercus__2107709__D97-226
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5a3lA00 2.60.120.1560 Mainly Beta › Sandwich › Jelly Rolls › 0.58 46.0 3.77e-01 87.0% 88.0%
3bzwF00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.55 41.0 3.23e-01 79.6% 68.3%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.54 41.0 4.11e-01 81.5% 99.1%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 3.43e-01 81.5% 86.2%
4ivkA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 44.0 3.02e-01 94.4% 84.2%
3g1nA02 3.30.2160.10 Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain 0.52 31.0 3.47e-01 84.3% 78.8%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 38.0 3.24e-01 79.6% 81.5%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3734190 2484.1.1.220 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27033 0.60 43.0 3.33e-01 74.1% 82.4%
3687431 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.60 43.0 3.42e-01 74.1% 85.3%
4154245 2484.1.1.29 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA 0.59 42.0 4.04e-01 75.0% 86.9%
3732773 2484.1.1.220 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27033 0.59 42.0 3.45e-01 75.9% 84.3%
4011640 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 42.0 3.45e-01 76.9% 81.0%
5018354 10.18.1.0 ↗ beta sandwiches › jelly-roll › VPA0735-like › VPA0735-like 0.56 43.0 3.31e-01 81.5% 85.7%
3280024 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.55 41.0 3.16e-01 79.6% 60.8%
4156749 3234.1.1.2 ↗ a+b two layers › GerBC protein › GerBC protein › GerBC protein › Spore_GerAC, Spore_GerAC_N 0.55 42.0 3.19e-01 83.3% 67.4%
3927107 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.54 42.0 4.07e-01 83.3% 84.8%
3925323 10.12.1.12 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD 0.54 41.0 3.04e-01 80.6% 68.3%
3734951 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 41.0 3.27e-01 82.4% 85.2%
4949745 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.52 37.0 2.89e-01 75.0% 75.0%
5012345 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.52 38.0 2.91e-01 76.9% 75.3%
3507557 4081.1.1.11 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › CreD 0.51 38.0 3.03e-01 78.7% 94.9%
3475092 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.51 35.0 2.86e-01 70.4% 60.5%
3508694 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.51 41.0 3.47e-01 90.7% 99.5%
5028941 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.22e-01 83.3% 92.2%
4967498 3110.1.1.0 ↗ a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.50 44.0 3.31e-01 99.1% 38.2%
3332357 221.1.1.51 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 0.50 37.0 3.45e-01 87.0% 61.9%
D2 high residues 161-290
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_54__YP_009482745__Pandoravirus_quercus__2107709__D191-289