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hypothetical_protein_pqer_cds_1044

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_1044__YP_009483735__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483735 ↗
Protein ID:
hypothetical_protein_pqer_cds_1044
Kingdom:
euk

Quality

77.5 mean pLDDT

Taxonomy

TaxID: 2107709

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-62
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hfiA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.76 66.0 5.00e-01 100.0% 58.5%
4c0zA02 1.10.150.480 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.70 62.0 5.04e-01 100.0% 90.6%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.70 62.0 4.87e-01 100.0% 70.5%
2oezA02 1.10.3900.10 Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like 0.69 60.0 4.25e-01 100.0% 71.8%
6zhiB02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.67 56.0 4.89e-01 100.0% 81.9%
1v9vA01 1.20.1480.20 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like 0.66 54.0 4.48e-01 94.1% 96.8%
4al0A00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.66 54.0 3.87e-01 90.2% 67.8%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.65 54.0 5.35e-01 94.1% 87.3%
1vq8P03 1.10.1200.60 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › 0.65 51.0 5.07e-01 88.2% 85.5%
2g80A02 1.10.720.60 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.64 54.0 4.79e-01 100.0% 91.0%
1bywA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.64 49.0 3.96e-01 88.2% 89.1%
2kpqA01 6.10.250.730 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.64 53.0 4.73e-01 96.1% 71.6%
4m0mA03 1.20.1270.430 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.63 51.0 4.54e-01 96.1% 92.4%
7s0rB01 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.62 53.0 4.65e-01 96.1% 82.9%
3nynA03 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.62 51.0 4.47e-01 96.1% 64.2%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 51.0 4.79e-01 100.0% 92.3%
1lq7A00 1.20.1270.70 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle 0.61 52.0 4.81e-01 100.0% 89.6%
3bbzA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.61 49.0 5.08e-01 96.1% 97.9%
1n5uA02 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.61 47.0 3.99e-01 88.2% 76.7%
3i2fA02 1.10.3020.10 Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) 0.60 48.0 4.06e-01 94.1% 61.1%
3h0dB02 1.10.1200.150 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain 0.60 50.0 4.32e-01 94.1% 72.8%
1r4gA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.60 50.0 4.96e-01 96.1% 94.3%
1oksA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.59 51.0 5.09e-01 100.0% 96.2%
1ywmA02 1.20.1270.150 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Surface Active Protein 0.58 48.0 4.29e-01 96.1% 81.6%
2ffjA01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.58 46.0 4.50e-01 92.2% 100.0%
2yguC00 1.10.238.190 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.57 39.0 2.97e-01 70.6% 99.2%
6fakA02 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.57 45.0 3.90e-01 88.2% 85.2%
3t9oB00 1.20.120.30 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain 0.57 45.0 3.58e-01 94.1% 60.8%
1avoB00 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.57 45.0 3.44e-01 96.1% 80.7%
2hpsA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 45.0 3.27e-01 100.0% 58.2%
2debB02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.56 44.0 2.83e-01 90.2% 58.7%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.56 45.0 3.82e-01 92.2% 67.8%
3fvvA02 1.20.1440.100 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function 0.54 43.0 3.99e-01 100.0% 80.0%
3nuwA02 3.30.420.310 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain 0.54 41.0 2.88e-01 90.2% 82.4%
2n5fA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 37.0 2.91e-01 78.4% 30.1%
2j0wA02 1.20.120.1320 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain 0.54 43.0 3.75e-01 100.0% 68.8%
4heoA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.53 42.0 4.15e-01 100.0% 92.7%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.51 42.0 3.94e-01 98.0% 92.5%
1pjqA03 1.10.8.210 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Sirohaem synthase, dimerisation domain 0.50 39.0 3.66e-01 88.2% 89.2%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5046473 601.3.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.79 69.0 5.78e-01 100.0% 58.9%
4213337 4952.1.1.0 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.78 61.0 4.86e-01 86.3% 71.0%
5068840 632.25.1.8 alpha bundles › immunoglobulin/albumin-binding domain-like › GBS CAMP factor N-terminal domain › GBS CAMP factor N-terminal domain › NADH_4Fe-4S 0.75 64.0 5.11e-01 100.0% 56.4%
3978820 4952.1.1.1 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 0.73 61.0 4.79e-01 92.2% 69.5%
1936033 186.1.1.6 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_6 0.71 63.0 4.34e-01 100.0% 33.1%
5036824 4952.1.1.0 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.70 61.0 4.84e-01 100.0% 69.5%
3277930 632.2.1.17 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1707 0.67 54.0 5.47e-01 92.2% 92.0%
4992678 632.2.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.67 55.0 5.37e-01 90.2% 90.9%
3952457 632.2.1.17 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1707 0.66 55.0 5.43e-01 100.0% 87.3%
3656937 810.1.1.1 a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › ChaC 0.65 44.0 3.55e-01 70.6% 43.8%
3286824 632.2.1.17 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1707 0.65 50.0 5.32e-01 84.3% 95.6%
3961272 632.3.1.9 alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › DUF1707 0.65 51.0 5.39e-01 86.3% 97.8%
3955218 632.2.1.17 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1707 0.65 51.0 5.38e-01 86.3% 97.8%
2507422 632.2.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › GA 0.64 54.0 5.32e-01 96.1% 87.3%
3319901 3050.1.1.7 alpha bundles › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal protein L19 (L19e) C-terminal domain › Ribosomal_L19e_C 0.64 51.0 3.78e-01 90.2% 36.3%
4324305 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 54.0 3.41e-01 100.0% 36.8%
3337428 7579.1.1.5 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 0.63 53.0 3.47e-01 100.0% 38.8%
3221955 601.25.1.0 alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain 0.63 53.0 3.78e-01 96.1% 44.2%
4031266 632.2.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › GA 0.62 52.0 5.19e-01 96.1% 88.9%
5060017 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.62 50.0 4.72e-01 94.1% 90.8%
3976109 632.7.1.61 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › BREX_BrxC_helical 0.62 49.0 4.16e-01 100.0% 66.7%
3590851 181.2.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › CtsR dimerization domain › CtsR dimerization domain › CtsR_C 0.62 51.0 4.45e-01 94.1% 72.5%
3286065 632.15.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) 0.61 49.0 4.60e-01 100.0% 88.6%
4031187 632.19.1.3 alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 0.61 51.0 4.55e-01 96.1% 92.0%
4983596 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.61 51.0 4.78e-01 100.0% 93.8%
4479999 632.19.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A 0.60 49.0 4.00e-01 96.1% 64.8%
3901205 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.60 49.0 3.82e-01 94.1% 60.9%
3431353 1128.1.1.10 alpha bundles › LYR protein › LYR protein › LYR protein › VIN3_C 0.59 51.0 4.65e-01 100.0% 80.0%
4196088 150.1.1.175 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › BREX_BrxC_helical 0.59 49.0 4.03e-01 100.0% 65.7%
3575986 5067.1.1.0 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.59 45.0 3.19e-01 88.2% 38.8%
3213337 102.1.1.16 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 0.59 50.0 4.32e-01 100.0% 77.6%
4981741 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.59 48.0 4.67e-01 100.0% 95.0%
3701328 109.4.1.1362 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG5_C 0.58 40.0 2.99e-01 70.6% 37.7%
4774281 1147.1.1.1 alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL 0.58 41.0 3.33e-01 78.4% 67.0%
3996960 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.57 41.0 3.91e-01 82.4% 65.0%
4678110 632.2.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.57 46.0 4.09e-01 96.1% 63.7%
5066642 4009.1.1.1 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom 0.56 47.0 4.33e-01 100.0% 91.4%
3517647 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.56 48.0 4.08e-01 100.0% 81.1%
4960785 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.56 44.0 4.15e-01 96.1% 91.4%
3587779 138.1.1.0 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.56 46.0 4.07e-01 96.1% 75.0%
5074496 601.28.1.0 alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.55 47.0 4.12e-01 100.0% 83.7%
4976690 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.55 44.0 4.49e-01 90.2% 98.0%
4195230 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.55 44.0 3.55e-01 100.0% 90.8%
3276922 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.55 40.0 4.01e-01 84.3% 83.6%
3622590 323.1.1.6 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Carn_acyltransf 0.54 47.0 2.65e-01 100.0% 15.5%
4646627 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.53 39.0 3.76e-01 84.3% 81.7%
3223083 323.1.1.6 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Carn_acyltransf 0.52 42.0 2.43e-01 100.0% 29.5%
4927753 632.2.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.51 41.0 3.87e-01 96.1% 75.4%
4002672 632.2.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.50 36.0 3.75e-01 88.2% 97.8%