←Back to structures

hypothetical_protein_pqer_cds_1073

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_1073__YP_009483764__Pandoravirus_quercus__2107709

Identity

Accession:: YP_009483764 ↗
Protein ID:: hypothetical_protein_pqer_cds_1073
Kingdom:: euk

Quality

75.1 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 24-96

PDB

Domain cluster: rep: F-box_domain__YP_008436654__Pandoravirus_salinus__1349410__D37-104

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4hteA03	1.10.167.30	Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 ›	0.60	46.0	4.55e-01	83.6%	81.2%
1lk3A00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.59	49.0	3.98e-01	90.4%	67.6%
1lvfB00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.56	45.0	4.05e-01	89.0%	76.0%
5haxA01	1.20.58.1780	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.52	43.0	3.06e-01	93.2%	46.9%
4jgwA01	1.20.870.10	Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1	0.51	42.0	3.35e-01	93.2%	54.5%
6s8bA01	1.10.520.30	Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain	0.50	37.0	3.03e-01	84.9%	40.1%

ECOD (17)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4978572	604.17.1.1 ↗	alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like › DUF447_C	0.75	50.0	5.16e-01	89.0%	72.5%
3195357	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.71	51.0	3.15e-01	100.0%	13.8%
3206932	207.1.1.0 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats	0.71	53.0	3.36e-01	79.5%	43.9%
3762363	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.71	52.0	3.09e-01	78.1%	89.3%
4033890	604.39.1.15 ↗	alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › DUF2232	0.67	41.0	3.25e-01	89.0%	29.0%
3328883	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.64	46.0	4.48e-01	75.3%	92.5%
5058433	7516.1.1.2 ↗	a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2	0.64	51.0	3.36e-01	86.3%	21.3%
4011424	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.63	58.0	5.39e-01	100.0%	98.9%
3642615	109.4.1.297 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_EMC2	0.59	51.0	4.08e-01	93.2%	51.9%
3637143	109.4.1.356 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans	0.58	50.0	3.01e-01	93.2%	16.5%
3950687	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.58	44.0	3.79e-01	93.2%	51.3%
3193086	109.4.1.356 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans	0.56	48.0	2.93e-01	93.2%	18.2%
5005596	7014.1.1.2 ↗	alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE	0.56	50.0	3.37e-01	100.0%	69.3%
3812206	145.1.1.1 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box	0.55	47.0	4.74e-01	100.0%	92.0%
3259075	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.54	46.0	4.55e-01	100.0%	87.2%
3664817	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.53	48.0	4.71e-01	100.0%	91.3%
3363836	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.53	47.0	4.52e-01	100.0%	89.4%

D2 medium residues 97-113_125-267

PDB

Domain cluster: rep: F-box_domain_containing_protein__YP_009480767__Pandoravirus_macleodensis__2107707__D109-271

D3 medium residues 268-327

PDB