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hypothetical_protein_pqer_cds_111

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_111__YP_009482802__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009482802 ↗
Protein ID:
hypothetical_protein_pqer_cds_111
Kingdom:
euk

Quality

73.3 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (43 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 110-138_151-174
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s3rA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.63 46.0 4.66e-01 94.3% 79.2%
1kiaA01 3.30.46.10 Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 0.62 47.0 4.15e-01 96.2% 54.2%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 52.0 4.17e-01 100.0% 77.5%
1pfoA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.60 43.0 4.38e-01 94.3% 79.2%
7txwA01 2.90.20.10 Mainly Beta › Orthogonal Prism › Plasmodium vivax P25 fold › Plasmodium vivax P25 domain 0.60 40.0 3.68e-01 71.7% 94.7%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.60 42.0 4.07e-01 98.1% 65.1%
4yfbC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.60 42.0 3.79e-01 86.8% 52.6%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.59 48.0 3.39e-01 98.1% 58.5%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 45.0 3.69e-01 90.6% 78.2%
4bgjA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 40.0 3.25e-01 100.0% 34.7%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.57 40.0 4.02e-01 96.2% 71.4%
3vhxF00 2.60.40.4330 Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain 0.57 41.0 3.43e-01 96.2% 42.2%
1jkfA03 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 36.0 3.54e-01 96.2% 60.0%
2gtlM02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.55 45.0 3.26e-01 100.0% 30.7%
4eziA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 43.0 2.89e-01 100.0% 37.9%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 46.0 3.35e-01 100.0% 33.5%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.54 42.0 3.63e-01 88.7% 55.1%
1rxtC02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 42.0 2.95e-01 88.7% 39.4%
3hvnA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.54 39.0 3.99e-01 96.2% 83.0%
4i5sA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 37.0 3.28e-01 96.2% 43.9%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 35.0 3.18e-01 100.0% 45.7%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 44.0 3.55e-01 98.1% 51.4%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 43.0 3.11e-01 100.0% 30.7%
4jhmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 41.0 3.33e-01 100.0% 42.7%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 42.0 3.52e-01 98.1% 86.7%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 39.0 3.60e-01 100.0% 61.3%
3luqB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 36.0 3.03e-01 96.2% 37.7%
6hswA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 41.0 2.52e-01 100.0% 23.0%
5ig0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 42.0 3.28e-01 100.0% 44.3%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.20e-01 100.0% 39.8%
5cxoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.22e-01 100.0% 42.5%
1o5yA00 3.10.690.10 Alpha Beta › Roll › Bifunctional nuclease domain › Bifunctional nuclease domain 0.51 39.0 2.92e-01 86.8% 97.2%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3244742 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.68 51.0 3.21e-01 100.0% 15.2%
4682079 4.6.1.6 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.63 43.0 3.81e-01 100.0% 45.9%
3626321 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.63 43.0 4.29e-01 98.1% 69.1%
3205351 7579.1.1.44 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 0.63 43.0 2.65e-01 94.3% 10.4%
5068089 283.1.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.62 43.0 3.48e-01 94.3% 34.8%
4944821 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.62 45.0 4.45e-01 100.0% 73.3%
3728231 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 52.0 3.39e-01 100.0% 22.6%
3473720 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.61 47.0 3.94e-01 100.0% 45.5%
3697945 4.1.1.312 ↗ beta barrels › SH3 › SH3 › SH3 › Med13_N 0.60 51.0 3.51e-01 100.0% 78.5%
4177430 7520.1.1.1 ↗ a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA 0.60 45.0 3.36e-01 100.0% 30.0%
3279764 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 40.0 3.77e-01 100.0% 54.3%
3733008 2484.1.1.114 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.59 48.0 3.01e-01 96.2% 15.6%
3931232 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 49.0 3.85e-01 100.0% 60.0%
3636954 7579.1.1.92 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Abhydrolase_6 0.59 40.0 2.48e-01 94.3% 10.3%
3201807 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.59 41.0 2.98e-01 75.5% 81.9%
4997494 3435.1.1.0 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.59 50.0 3.36e-01 100.0% 32.3%
2780879 1172.1.1.1 ↗ beta barrels › UL131A-like › UL130 C-terminal domain › UL130 C-terminal domain › Gp_UL130 0.59 44.0 3.65e-01 100.0% 42.3%
2418837 3880.1.1.2 ↗ beta barrels › Glycoside hydrolase family 127 C-terminal domain › Glycoside hydrolase family 127 C-terminal domain › Glycoside hydrolase family 127 C-terminal domain › Glyco_hydro127C 0.58 45.0 3.34e-01 84.9% 33.1%
4020185 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.58 45.0 3.64e-01 92.5% 70.0%
3588721 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.58 42.0 3.50e-01 98.1% 39.1%
4126991 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 47.0 3.98e-01 100.0% 53.3%
4493758 7512.1.1.24 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5 0.58 44.0 2.84e-01 86.8% 23.2%
3595489 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 42.0 4.06e-01 100.0% 68.3%
3917310 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.57 40.0 3.82e-01 100.0% 61.5%
3678038 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.57 42.0 3.82e-01 100.0% 57.3%
3727278 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.57 48.0 3.28e-01 100.0% 29.8%
3959235 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 43.0 2.83e-01 100.0% 17.7%
3408176 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.56 48.0 3.74e-01 100.0% 94.2%
5014316 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 42.0 3.17e-01 90.6% 36.9%
3504767 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.55 41.0 3.80e-01 100.0% 61.4%
4012171 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.55 45.0 3.06e-01 100.0% 26.1%
4593266 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 47.0 4.24e-01 100.0% 78.7%
3743876 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.55 45.0 3.08e-01 100.0% 25.9%
3986460 223.1.1.24 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 0.54 40.0 3.25e-01 98.1% 37.5%
140636 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.54 41.0 2.58e-01 90.6% 34.6%
4158399 2492.1.1.2 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.54 39.0 2.77e-01 100.0% 22.6%
4342104 2492.1.1.2 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.54 39.0 2.82e-01 100.0% 23.8%
4973777 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.54 39.0 2.88e-01 90.6% 27.5%
3993158 304.9.1.25 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_7 0.54 43.0 3.23e-01 98.1% 57.5%
3961460 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 38.0 2.90e-01 100.0% 28.0%
4018556 330.1.1.4 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 0.53 41.0 3.09e-01 100.0% 31.2%
3716709 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 42.0 3.45e-01 100.0% 75.6%
3262461 2.1.1.42 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.53 44.0 3.15e-01 100.0% 36.7%
3635023 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 42.0 2.52e-01 100.0% 12.7%
3676791 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 41.0 3.77e-01 100.0% 62.7%
3426315 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.52 40.0 3.51e-01 98.1% 53.3%
1558580 79.1.1.14 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › CofB_beta-rpt 0.52 38.0 3.34e-01 84.9% 49.5%
418817 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.52 44.0 3.09e-01 100.0% 65.2%
3283746 330.1.1.16 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DUF6968 0.51 40.0 3.57e-01 100.0% 58.7%
4615629 4.1.1.449 ↗ beta barrels › SH3 › SH3 › SH3 › DUF1292 0.51 44.0 3.84e-01 100.0% 62.4%
3703463 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.51 43.0 2.32e-01 100.0% 7.7%
3479782 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 40.0 2.91e-01 96.2% 45.3%