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hypothetical_protein_pqer_cds_1122

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_1122__YP_009483813__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483813 ↗
Protein ID:
hypothetical_protein_pqer_cds_1122
Kingdom:
euk

Quality

73.1 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (47 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 490-666
PDB
Domain cluster: rep: hypothetical_protein_psal_cds_1275__YP_009430140__Pandoravirus_salinus__1349410__D406-569
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3n2oA03 1.20.58.930 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 34.0 4.51e-01 76.3% 90.6%
2ijeS00 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.55 40.0 3.60e-01 75.1% 54.9%
5cwkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 42.0 4.30e-01 96.0% 86.3%
5mi7A03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.53 40.0 3.50e-01 99.4% 51.9%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.53 29.0 3.52e-01 85.9% 81.4%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.53 32.0 3.63e-01 85.9% 80.5%
2bb5A01 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.52 38.0 3.24e-01 98.3% 43.6%
3qmlD00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 42.0 3.63e-01 97.2% 56.0%
4j8sA00 1.25.40.840 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain 0.51 39.0 3.97e-01 89.3% 78.9%
6i57A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 32.0 3.67e-01 96.6% 87.2%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3407304 109.4.1.32 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G 0.62 48.0 4.10e-01 80.2% 84.9%
3512675 109.4.1.1579 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TELO2_ARM 0.59 46.0 4.63e-01 94.9% 79.4%
3936543 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 45.0 4.10e-01 96.6% 60.9%
4026378 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 44.0 3.87e-01 94.9% 54.5%
3332757 109.4.1.1528 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TEX10 0.56 50.0 4.69e-01 99.4% 78.6%
4026324 604.39.1.12 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › VTT_dom 0.56 39.0 4.25e-01 93.2% 84.0%
4782661 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.54 43.0 4.36e-01 97.2% 85.5%
3748995 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 46.0 4.29e-01 89.3% 78.1%
3600028 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 46.0 3.74e-01 95.5% 48.7%
3775731 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 37.0 4.20e-01 72.9% 100.0%
None — 0.53 32.0 3.76e-01 96.0% 86.9%
3679873 109.4.1.90 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TOM20_plant 0.52 37.0 3.83e-01 99.4% 77.3%
3591919 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 44.0 3.44e-01 96.0% 41.3%
3503832 109.4.1.502 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med12-LCEWAV 0.51 46.0 3.80e-01 96.0% 72.5%
4025545 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.51 41.0 4.35e-01 96.6% 96.2%
3449471 109.4.1.791 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_17 0.50 35.0 3.86e-01 92.7% 89.3%