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hypothetical_protein_pqer_cds_1143

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_1143__YP_009483834__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483834 ↗
Protein ID:
hypothetical_protein_pqer_cds_1143
Kingdom:
euk

Quality

54.0 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-186
PDB
D2 high residues 461-522
PDB
Domain cluster: rep: Rho_binding_incomplete_domain_containing_protein__YP_009482554__Pandoravirus_neocaledonia__2107708__D641-671_692-708
D3 medium residues 209-296
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.80 48.0 4.90e-01 70.5% 62.4%
5k3hB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.76 65.0 5.61e-01 93.2% 73.7%
3unoE00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.72 53.0 4.27e-01 77.3% 78.4%
2fonA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.72 61.0 5.36e-01 93.2% 72.9%
6fhoA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.71 49.0 3.74e-01 71.6% 34.5%
3fr3B02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.70 46.0 4.17e-01 80.7% 50.4%
2f3oA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.67 54.0 3.17e-01 88.6% 11.3%
1gqeA01 1.20.58.410 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor 0.66 55.0 5.13e-01 92.0% 95.6%
1r9dA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.66 59.0 3.41e-01 98.9% 47.1%
3buxB01 1.20.930.20 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain 0.64 55.0 4.91e-01 97.7% 72.1%
5mmjo00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.63 43.0 4.62e-01 83.0% 84.0%
2qffA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.61 41.0 4.44e-01 92.0% 82.4%
3sllA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.60 40.0 4.70e-01 73.9% 100.0%
5a0uA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.59 50.0 2.97e-01 98.9% 46.8%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.55 48.0 4.54e-01 98.9% 91.4%
4a4kA01 1.20.1500.20 Mainly Alpha › Up-down Bundle › YheA-like fold › 0.54 43.0 3.94e-01 89.8% 66.4%
4i9oA00 1.10.246.20 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain 0.52 37.0 3.89e-01 86.4% 84.6%
1yvwA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.52 43.0 4.25e-01 97.7% 83.7%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1030831 5094.1.1.1 ↗ a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.79 56.0 4.47e-01 73.9% 75.0%
3622487 604.7.1.1 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.77 54.0 4.94e-01 71.6% 74.5%
3784738 3755.4.1.43 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Ran-binding 0.74 61.0 5.12e-01 90.9% 62.7%
3636334 4177.1.1.5 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 0.73 60.0 4.31e-01 88.6% 71.6%
3655797 632.22.1.88 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › DUF6490 0.71 56.0 5.76e-01 88.6% 88.2%
3610706 3602.1.1.0 ↗ alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain 0.70 53.0 5.53e-01 84.1% 85.0%
4970712 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.70 57.0 5.41e-01 89.8% 90.5%
4983663 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.67 57.0 5.84e-01 93.2% 94.0%
4058838 547.1.1.1 ↗ alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer 0.67 48.0 5.08e-01 85.2% 88.0%
3928838 103.4.1.0 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.66 51.0 5.33e-01 89.8% 92.5%
3517579 6004.1.1.2 ↗ extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 0.65 50.0 5.18e-01 92.0% 88.7%
3538067 633.10.1.15 ↗ alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 0.65 53.0 5.30e-01 88.6% 91.1%
3668007 601.51.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin 0.64 54.0 3.86e-01 93.2% 62.7%
3331809 375.1.9.23 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › Sterile 0.62 43.0 3.52e-01 73.9% 47.4%
3672257 632.19.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A 0.61 47.0 4.61e-01 84.1% 75.8%
3728508 109.3.1.179 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF7708 0.61 54.0 4.03e-01 97.7% 69.3%
3454208 632.15.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) 0.61 47.0 4.86e-01 94.3% 92.5%
3647788 632.1.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.55 46.0 4.51e-01 94.3% 86.3%
4952348 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 40.0 3.10e-01 83.0% 42.5%
None — 0.51 43.0 2.51e-01 95.5% 28.6%
3924976 3345.1.1.0 ↗ alpha arrays › MRG domain › MRG domain › MRG domain 0.51 43.0 3.62e-01 98.9% 89.7%