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hypothetical_protein_pqer_cds_139

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_139__YP_009482830__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009482830 ↗
Protein ID:
hypothetical_protein_pqer_cds_139
Kingdom:
euk

Quality

71.0 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 59-157
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_1104__YP_009483795__Pandoravirus_quercus__2107709__D75-181
D2 medium residues 214-291_340-362_403-468
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5vjcA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.67 61.0 5.26e-01 100.0% 81.3%
4y5jA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.67 61.0 5.53e-01 100.0% 75.3%
5dn7A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.65 60.0 5.30e-01 100.0% 70.4%
2b1eA02 1.20.1310.30 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › 0.64 46.0 4.85e-01 73.7% 100.0%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 59.0 5.66e-01 100.0% 88.7%
3woyA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.64 58.0 5.14e-01 100.0% 72.8%
5hayA02 1.25.40.440 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Nucleoporin, helical domain, central subdomain 0.64 32.0 4.32e-01 78.4% 97.5%
3fayA00 1.10.506.10 Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 0.61 47.0 3.59e-01 79.6% 79.9%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 55.0 4.65e-01 100.0% 59.3%
3l6aA01 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 54.0 5.26e-01 100.0% 93.2%
4e6hA00 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 51.0 3.55e-01 96.4% 29.8%
2pmvA01 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.57 44.0 3.78e-01 85.0% 50.4%
5an3A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 38.0 4.18e-01 79.6% 84.5%
5cl3A00 1.25.10.90 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › 0.57 48.0 4.37e-01 97.0% 66.2%
1o5hA00 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.55 43.0 4.07e-01 81.4% 95.0%
5djsA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 38.0 4.10e-01 83.8% 84.6%
4rfsS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.54 38.0 3.75e-01 71.9% 85.0%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.54 44.0 4.59e-01 88.0% 94.2%
1yz5B00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.53 43.0 3.86e-01 85.0% 89.5%
5kbwB00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.52 37.0 3.67e-01 71.3% 86.5%
4hfvA01 1.20.1440.330 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.52 31.0 3.57e-01 85.6% 82.1%
2oerA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 41.0 4.01e-01 83.2% 95.5%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3897508 109.4.1.843 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EFR3_ARM 0.71 64.0 4.49e-01 97.6% 42.7%
5057281 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.70 48.0 5.04e-01 100.0% 77.3%
3809529 109.4.1.483 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Neurobeachin 0.69 53.0 5.19e-01 80.8% 98.4%
3716039 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 62.0 3.95e-01 97.6% 24.1%
5056251 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 49.0 3.94e-01 100.0% 38.7%
3327860 109.4.1.1273 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 0.69 55.0 5.89e-01 94.6% 97.9%
3643672 109.4.1.891 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_HEATR1 0.68 62.0 4.58e-01 100.0% 58.2%
3704679 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 60.0 5.22e-01 95.8% 82.7%
3172484 109.4.1.457 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Urb2 0.68 62.0 3.72e-01 100.0% 18.6%
3430024 109.4.1.1185 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BTB-POZ_ANK-like 0.68 61.0 5.23e-01 97.0% 86.8%
3781527 109.4.1.44 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps35 0.67 56.0 4.63e-01 88.6% 61.7%
3901387 109.4.1.1784 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28344 0.67 59.0 4.18e-01 95.8% 38.8%
3623632 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 46.0 4.14e-01 71.3% 91.7%
3401491 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 60.0 5.36e-01 99.4% 71.1%
None — 0.64 51.0 5.08e-01 82.6% 94.7%
3913495 109.4.1.465 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPO22 0.60 54.0 3.46e-01 100.0% 20.4%
3697513 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.60 49.0 4.27e-01 87.4% 74.7%
3726859 109.4.1.681 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 0.59 47.0 3.93e-01 86.2% 61.7%
3765404 109.24.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › ARM_KNTC1_3rd 0.58 44.0 3.86e-01 89.8% 51.8%
3542548 109.4.1.70 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.57 52.0 5.02e-01 100.0% 89.2%
3356125 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.56 49.0 3.67e-01 100.0% 38.0%
3342480 109.4.1.1293 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 0.56 50.0 4.71e-01 100.0% 87.1%
3651542 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.55 47.0 4.31e-01 100.0% 69.8%
3675450 109.4.1.621 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 0.54 44.0 4.42e-01 94.6% 85.7%
3826413 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 48.0 4.67e-01 100.0% 90.8%
3693516 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 42.0 4.18e-01 89.2% 83.5%
5052429 604.39.1.3 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF-ribofla_trS 0.51 37.0 3.58e-01 71.9% 79.5%
3717387 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.51 38.0 3.42e-01 76.0% 94.8%
D3 medium residues 469-522
PDB
Domain cluster: rep: hypothetical_protein_pmac_cds_97__YP_009480781__Pandoravirus_macleodensis__2107707__D460-519