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hypothetical_protein_pqer_cds_187

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_187__YP_009482878__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009482878 ↗
Protein ID:
hypothetical_protein_pqer_cds_187
Kingdom:
euk

Quality

55.5 mean pLDDT

Taxonomy

TaxID: 2107709

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-83
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vpkA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.71 53.0 4.65e-01 100.0% 53.0%
2vkpB00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.66 52.0 4.66e-01 100.0% 60.6%
4cxjA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.66 54.0 4.51e-01 100.0% 51.9%
4tq1A02 3.10.20.620 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.63 45.0 4.29e-01 75.3% 87.9%
2wxfA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 44.0 3.80e-01 74.0% 72.3%
1ef1A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.60 42.0 4.21e-01 74.0% 100.0%
2dafA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 42.0 4.25e-01 74.0% 98.7%
2kd0A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 41.0 4.33e-01 74.0% 100.0%
1v6eA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 41.0 4.10e-01 74.0% 100.0%
4m8mA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 42.0 3.62e-01 75.3% 81.5%
4hwiB01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 41.0 4.27e-01 74.0% 100.0%
1wghA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 41.0 4.01e-01 74.0% 98.8%
1euvB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 41.0 4.11e-01 74.0% 89.9%
2dnfA01 3.10.20.230 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain 0.58 41.0 3.94e-01 75.3% 84.3%
1v86A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 43.0 3.99e-01 79.2% 76.8%
4d2kB00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 41.0 4.07e-01 75.3% 90.0%
2fnjB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 42.0 3.84e-01 76.6% 81.6%
2kanA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 41.0 4.20e-01 75.3% 100.0%
1wx8A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 40.0 3.78e-01 75.3% 75.0%
1t0yA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 41.0 3.87e-01 75.3% 90.0%
4kv2A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.55 39.0 3.73e-01 74.0% 97.8%
2gbmA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.55 38.0 3.77e-01 72.7% 97.5%
2dzmA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 38.0 3.91e-01 72.7% 98.6%
2l76A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 38.0 3.59e-01 75.3% 75.8%
1c9fA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 37.0 3.60e-01 74.0% 79.3%
5ffiE00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.52 36.0 3.27e-01 71.4% 100.0%
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.52 46.0 4.26e-01 97.4% 91.7%
1hezE00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 36.0 3.99e-01 72.7% 96.7%
5heeA00 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.52 43.0 3.11e-01 98.7% 40.5%
1d4bA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 36.0 3.15e-01 74.0% 56.6%
3p42A01 3.10.20.700 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 36.0 3.47e-01 74.0% 86.7%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4292998 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.74 57.0 4.74e-01 100.0% 47.4%
3453057 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.73 59.0 5.32e-01 100.0% 62.7%
3813062 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.73 58.0 5.09e-01 100.0% 56.7%
3431801 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.72 62.0 4.93e-01 100.0% 47.1%
3861990 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.72 56.0 4.68e-01 100.0% 48.1%
3574767 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.72 57.0 4.22e-01 100.0% 33.8%
3301274 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.71 61.0 4.77e-01 100.0% 45.0%
3618613 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.71 65.0 4.91e-01 100.0% 48.6%
3535205 226.1.1.46 a+b two layers › POZ domain › POZ domain › POZ domain › BACK 0.71 58.0 4.50e-01 98.7% 40.0%
3713502 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.71 58.0 4.03e-01 100.0% 28.5%
3637746 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.70 55.0 4.83e-01 100.0% 56.5%
3194808 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.70 56.0 4.81e-01 100.0% 55.0%
3378891 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.69 59.0 5.07e-01 100.0% 60.8%
3619409 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.68 52.0 4.62e-01 100.0% 56.5%
3722289 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.68 57.0 4.91e-01 100.0% 58.3%
3890333 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.67 55.0 4.66e-01 100.0% 52.6%
3687863 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.67 54.0 4.36e-01 100.0% 44.5%
3422238 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.67 57.0 4.59e-01 100.0% 49.0%
3688985 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.67 53.0 4.30e-01 100.0% 45.5%
4014431 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.66 58.0 4.28e-01 100.0% 42.9%
3673771 226.1.1.10 a+b two layers › POZ domain › POZ domain › POZ domain › KLHL33-like_BTB_POZ 0.66 59.0 5.12e-01 100.0% 65.8%
3628776 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.66 57.0 4.76e-01 100.0% 61.4%
3759810 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.65 53.0 4.20e-01 100.0% 42.4%
3653903 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.65 57.0 4.18e-01 100.0% 35.8%
3380545 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.65 58.0 4.37e-01 100.0% 41.1%
3508997 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.65 51.0 4.39e-01 100.0% 52.3%
3242951 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.65 57.0 5.02e-01 98.7% 71.3%
3257570 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.65 53.0 4.02e-01 100.0% 36.0%
3675866 109.27.1.4 alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BTB 0.64 54.0 4.07e-01 100.0% 37.9%
3689407 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.64 55.0 4.79e-01 100.0% 62.6%
3378713 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.64 57.0 4.56e-01 100.0% 51.6%
3237841 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.63 55.0 4.42e-01 100.0% 53.8%
3928664 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.63 55.0 4.55e-01 100.0% 53.1%
3698267 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.63 52.0 3.95e-01 100.0% 37.9%
3395811 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.62 55.0 4.66e-01 100.0% 60.0%
3594463 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.62 56.0 4.09e-01 100.0% 38.5%
3829726 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.62 53.0 4.04e-01 100.0% 39.5%
3201445 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.62 54.0 4.71e-01 100.0% 64.2%
3182502 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.62 54.0 4.41e-01 98.7% 55.9%
3253403 221.1.1.8 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd 0.61 43.0 3.36e-01 74.0% 54.1%
3630713 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.61 54.0 4.57e-01 100.0% 59.2%
4567811 221.1.1.24 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblB 0.60 43.0 4.24e-01 76.6% 100.0%
4085794 226.1.1.6 a+b two layers › POZ domain › POZ domain › POZ domain › SANBR_BTB 0.60 52.0 3.98e-01 100.0% 40.5%
3953785 221.1.1.34 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › YukD 0.58 41.0 3.84e-01 74.0% 88.4%
4334558 221.1.1.178 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Sde2_N_Ubi_yeast 0.58 42.0 4.19e-01 76.6% 97.5%
3373917 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.58 41.0 4.01e-01 75.3% 94.1%
3726717 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.58 31.0 2.67e-01 89.6% 31.2%
3258474 221.1.1.44 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD 0.57 41.0 3.96e-01 75.3% 85.2%
3534015 221.1.1.168 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B 0.57 40.0 2.69e-01 74.0% 28.3%
3591307 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 41.0 3.82e-01 75.3% 93.7%
3321303 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.57 40.0 3.92e-01 74.0% 91.8%
3191929 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 41.0 3.62e-01 75.3% 95.5%
4329802 239.1.1.2 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_S6e 0.57 44.0 3.78e-01 84.4% 96.0%
6131 221.1.1.52 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 0.57 42.0 3.92e-01 77.9% 87.4%
3479436 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 40.0 3.72e-01 75.3% 93.0%
3242889 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 39.0 3.85e-01 74.0% 97.6%
3252925 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 40.0 3.86e-01 74.0% 91.8%
3256796 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.56 40.0 3.97e-01 75.3% 95.0%
4113663 221.1.1.34 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › YukD 0.56 40.0 3.95e-01 74.0% 93.8%
4878029 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.56 41.0 3.74e-01 77.9% 76.9%
3286644 221.1.1.34 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › YukD 0.55 39.0 3.66e-01 74.0% 87.4%
3708462 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 38.0 2.81e-01 74.0% 37.1%
3639487 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 38.0 3.36e-01 75.3% 97.4%
3801584 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.52 36.0 3.34e-01 72.7% 86.0%
1844314 2012.1.1.2 a/b three-layered sandwiches › LigB-like › LigB-like › LigB-like › LigB 0.52 43.0 3.11e-01 98.7% 40.5%
3991979 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.51 35.0 3.81e-01 75.3% 86.2%
3706348 221.1.4.0 a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like 0.51 37.0 3.34e-01 76.6% 99.0%
D2 medium residues 219-291
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yevC00 6.10.280.110 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 51.0 5.48e-01 94.5% 93.7%
3eslA01 1.20.58.2070 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 45.0 4.50e-01 93.2% 68.0%
3n5lA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 48.0 5.30e-01 90.4% 98.2%
4gzrB00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.66 51.0 5.08e-01 98.6% 79.2%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.65 51.0 5.37e-01 97.3% 96.8%
3g80A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.65 47.0 4.73e-01 98.6% 76.7%
1b3qA01 1.10.287.560 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain 0.65 46.0 4.86e-01 98.6% 88.7%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 46.0 4.58e-01 90.4% 75.7%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 50.0 4.92e-01 98.6% 82.9%
1nu7D01 1.20.120.750 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle domain 1 0.61 54.0 4.45e-01 100.0% 60.7%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 53.0 5.12e-01 95.9% 91.4%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.60 52.0 5.11e-01 97.3% 87.5%
5fmnA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.60 55.0 5.16e-01 100.0% 98.8%
1y1uA01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.60 54.0 3.90e-01 100.0% 78.5%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.59 53.0 4.70e-01 98.6% 76.7%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.59 53.0 4.76e-01 98.6% 76.0%
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.59 49.0 4.43e-01 98.6% 65.7%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.59 46.0 4.87e-01 91.8% 96.9%
6g94A00 1.20.950.20 Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C 0.59 49.0 3.81e-01 95.9% 95.9%
1gpjA03 1.10.1200.70 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glutamyl tRNA-reductase dimerization domain 0.58 40.0 3.83e-01 80.8% 61.2%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.58 51.0 5.05e-01 98.6% 92.2%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.58 46.0 4.86e-01 97.3% 98.4%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.58 51.0 4.66e-01 98.6% 95.8%
1avoB00 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.58 50.0 4.08e-01 98.6% 51.4%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.58 51.0 4.42e-01 95.9% 71.0%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.57 51.0 4.78e-01 97.3% 85.1%
3zbhA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.57 48.0 4.54e-01 93.2% 78.9%
7ymiZ01 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.57 40.0 4.33e-01 98.6% 96.6%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.57 49.0 4.17e-01 94.5% 61.5%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.56 39.0 3.83e-01 91.8% 65.1%
1kmiZ02 1.10.287.500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.56 48.0 3.96e-01 98.6% 52.2%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.56 50.0 4.51e-01 98.6% 74.7%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.56 48.0 4.74e-01 97.3% 92.2%
4nsmA00 6.10.250.2770 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.56 48.0 4.88e-01 100.0% 100.0%
1gaxA05 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.56 45.0 4.58e-01 95.9% 90.4%
7cosB02 1.10.1140.10 Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 0.56 37.0 3.68e-01 100.0% 64.9%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.55 47.0 4.14e-01 94.5% 75.2%
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.55 48.0 4.18e-01 95.9% 76.1%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.55 49.0 4.48e-01 98.6% 78.7%
7e4mA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.55 47.0 3.20e-01 95.9% 30.5%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.55 48.0 4.15e-01 95.9% 76.1%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 47.0 4.29e-01 100.0% 79.4%
2vs0A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.53 45.0 4.38e-01 95.9% 86.6%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 45.0 4.02e-01 95.9% 66.7%
4i0xG00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.53 44.0 4.58e-01 93.2% 100.0%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.52 42.0 4.27e-01 100.0% 91.9%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.52 45.0 4.54e-01 97.3% 98.6%
3cqcA00 1.20.190.50 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 0.52 43.0 3.11e-01 100.0% 49.0%
2hqmA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 45.0 3.19e-01 98.6% 43.0%
3t98B00 6.10.140.1350 Special › Helix non-globular › Helix Hairpins › 0.51 42.0 4.10e-01 100.0% 86.0%
6qumQ00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.51 42.0 4.27e-01 93.2% 97.3%
3hhcC00 1.20.1250.60 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interferon lambda 0.51 41.0 3.26e-01 89.0% 87.4%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5060845 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.68 41.0 4.34e-01 94.5% 67.7%
3344802 6158.1.1.0 alpha bundles › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region 0.65 50.0 5.25e-01 93.2% 93.8%
3579266 5055.1.1.11 extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel › Cation_ATPase_N 0.63 48.0 4.77e-01 95.9% 80.0%
3848998 192.10.1.0 alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain 0.63 55.0 5.40e-01 98.6% 98.7%
4520081 192.5.1.20 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › Val_tRNA-synt_C 0.62 45.0 4.88e-01 98.6% 95.0%
4009623 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.62 52.0 5.44e-01 93.2% 100.0%
3991599 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.61 55.0 4.98e-01 100.0% 83.0%
4463205 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.61 52.0 3.14e-01 93.2% 14.8%
3973966 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.61 47.0 4.29e-01 98.6% 62.0%
3477349 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.60 52.0 4.69e-01 100.0% 86.7%
4034092 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.60 54.0 5.36e-01 98.6% 98.7%
4043561 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.59 51.0 4.44e-01 98.6% 62.7%
3723324 3922.1.1.137 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › HisKA 0.59 50.0 5.09e-01 100.0% 97.1%
4147837 192.1.1.41 alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › Val_tRNA-synt_C 0.58 47.0 4.97e-01 90.4% 100.0%
3333878 601.1.2.75 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › PTPLA 0.57 47.0 3.44e-01 93.2% 34.3%
3937465 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.57 49.0 3.55e-01 98.6% 35.8%
3750000 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.56 48.0 4.26e-01 94.5% 72.4%
3620955 6170.1.1.23 alpha bundles › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › PRA1 0.56 43.0 3.88e-01 98.6% 57.3%
4324499 3755.1.1.3 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › SPAM 0.56 50.0 3.97e-01 98.6% 77.2%
3203464 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.56 48.0 4.48e-01 94.5% 87.8%
3839497 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.56 48.0 4.62e-01 98.6% 85.9%
3602776 605.6.1.12 alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like › PF27273 0.56 49.0 4.78e-01 98.6% 97.5%
3204770 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.55 48.0 3.92e-01 98.6% 53.6%
4086475 3755.3.1.466 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CC_BshC 0.55 46.0 3.58e-01 90.4% 45.8%
5008445 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.53 47.0 4.70e-01 98.6% 97.3%
4090297 4006.1.1.1 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.53 45.0 4.06e-01 98.6% 67.6%
3857357 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.53 46.0 4.04e-01 98.6% 69.1%
3282208 150.5.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 0.52 45.0 4.21e-01 98.6% 91.1%
4950767 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.51 44.0 3.33e-01 98.6% 37.9%
4970333 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.51 42.0 3.90e-01 97.3% 72.6%
4225217 3710.1.1.1 alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › CHD5 0.50 39.0 3.59e-01 98.6% 61.8%
D3 medium residues 292-352_483-529
PDB
Domain cluster: representative
D4 medium residues 353-418_454-482
PDB
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wfoA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.75 67.0 5.59e-01 100.0% 58.6%
3ghjA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.68 43.0 4.08e-01 71.6% 52.6%
6u8yK01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.67 48.0 4.01e-01 82.1% 45.5%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.65 53.0 4.45e-01 86.3% 89.4%
2r5vA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.64 51.0 4.37e-01 85.3% 79.3%
4fh3A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.64 56.0 5.10e-01 98.9% 73.6%
1sp8C02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 52.0 3.97e-01 87.4% 77.7%
6iw6A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.63 49.0 4.73e-01 89.5% 73.1%
3e0rB01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 50.0 4.66e-01 85.3% 91.6%
4hc5D00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 42.0 3.79e-01 70.5% 49.6%
4qt4A00 3.40.50.1470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase 0.63 48.0 3.91e-01 83.2% 67.7%
5b7gA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.63 49.0 3.57e-01 83.2% 84.3%
3bjeA01 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.62 48.0 3.30e-01 81.1% 85.6%
2mjlA00 3.40.50.1470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase 0.62 51.0 4.05e-01 89.5% 68.0%
3p8aA02 2.60.40.4320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 50.0 5.17e-01 89.5% 92.2%
4s3nA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.61 49.0 4.29e-01 87.4% 65.3%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.61 43.0 4.18e-01 72.6% 76.2%
2p25A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.61 42.0 3.90e-01 80.0% 56.3%
1f5aA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.61 53.0 4.57e-01 97.9% 71.2%
1rybA00 3.40.50.1470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase 0.61 47.0 3.82e-01 83.2% 69.4%
4iq0C02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.61 42.0 3.42e-01 70.5% 45.3%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.61 42.0 4.07e-01 72.6% 73.4%
6ywnA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.60 45.0 4.32e-01 92.6% 70.4%
3t1oA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 53.0 4.19e-01 97.9% 67.7%
4at7A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.59 53.0 4.58e-01 100.0% 69.1%
3o9zD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.59 44.0 3.61e-01 80.0% 88.3%
3rmuA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 47.0 4.20e-01 86.3% 94.8%
7x4qA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.58 52.0 4.50e-01 100.0% 80.1%
3r7wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 45.0 3.66e-01 83.2% 64.3%
3nybA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.58 44.0 4.29e-01 91.6% 71.8%
3nm6B00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.58 44.0 3.39e-01 82.1% 82.5%
4g41A00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.58 47.0 3.53e-01 88.4% 82.2%
1r89A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.58 50.0 4.57e-01 98.9% 75.0%
2nrkA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.58 50.0 4.23e-01 98.9% 77.6%
5c68A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 45.0 4.31e-01 83.2% 92.7%
4fidA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 43.0 3.47e-01 82.1% 58.0%
1cw1A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.55 48.0 3.21e-01 100.0% 44.3%
4r2xD00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.55 41.0 3.15e-01 82.1% 78.7%
3c1aA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 46.0 4.08e-01 95.8% 94.5%
2x3lA01 3.90.1150.150 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.54 42.0 4.06e-01 81.1% 84.8%
3g12B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 39.0 3.73e-01 75.8% 97.3%
2xtmA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 41.0 3.26e-01 83.2% 57.0%
2i7xA02 3.40.50.10890 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 46.0 3.64e-01 92.6% 90.4%
1z2aA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 40.0 3.45e-01 82.1% 66.5%
1pjzA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 45.0 3.62e-01 95.8% 66.2%
1pwuA04 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.53 38.0 2.87e-01 75.8% 31.7%
4uoiC00 3.30.160.890 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C 0.53 28.0 3.60e-01 74.7% 96.1%
1eljA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 41.0 3.28e-01 83.2% 66.1%
3p8aA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 39.0 3.37e-01 84.2% 48.1%
3uh9B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 43.0 3.85e-01 89.5% 91.7%
6jmgB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 46.0 3.77e-01 97.9% 83.8%
2ehbD00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.52 43.0 3.90e-01 89.5% 67.5%
3eeiA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.52 45.0 3.40e-01 96.8% 82.7%
2h8gA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.52 42.0 3.22e-01 92.6% 90.7%
1sqiA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 43.0 3.63e-01 94.7% 86.2%
1px5A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 39.0 3.50e-01 86.3% 56.6%
3f4lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 44.0 3.45e-01 100.0% 52.9%
1r9cA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 42.0 3.83e-01 89.5% 95.2%
3e82E02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 43.0 3.53e-01 100.0% 54.5%
4ku4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 44.0 3.63e-01 95.8% 91.2%
2ednA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 36.0 3.36e-01 73.7% 93.2%
1yqeA01 3.40.630.50 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like 0.50 43.0 3.54e-01 97.9% 81.7%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3250627 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.89 84.0 5.90e-01 100.0% 37.4%
3252046 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.89 84.0 6.07e-01 100.0% 51.1%
3274698 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.89 83.0 6.01e-01 100.0% 63.7%
3195886 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.86 81.0 5.28e-01 100.0% 31.1%
3269142 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.86 80.0 6.18e-01 100.0% 56.9%
3632181 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.85 79.0 6.19e-01 100.0% 60.5%
3273503 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.83 78.0 5.75e-01 100.0% 43.6%
3166717 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.76 48.0 5.62e-01 70.5% 92.3%
3614994 2004.1.1.132 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DLIC 0.70 56.0 3.90e-01 83.2% 60.8%
5001118 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.70 54.0 4.45e-01 81.1% 84.8%
3212938 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 51.0 3.59e-01 76.8% 53.2%
4995947 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.69 54.0 4.26e-01 83.2% 57.4%
4971611 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.68 53.0 4.24e-01 83.2% 60.5%
3319246 2007.5.1.17 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase 0.68 53.0 3.88e-01 83.2% 66.9%
3319016 2007.5.1.17 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase 0.68 52.0 3.75e-01 81.1% 57.3%
5080470 316.1.1.21 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit 0.67 60.0 4.50e-01 98.9% 57.0%
3807215 2007.5.1.20 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase,PMR5N 0.67 52.0 3.50e-01 81.1% 45.9%
4958430 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.67 59.0 4.42e-01 98.9% 61.3%
5079101 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.66 51.0 4.25e-01 83.2% 65.3%
4323659 211.1.1.54 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF27226 0.66 47.0 4.75e-01 83.2% 74.7%
3498699 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.66 51.0 4.05e-01 83.2% 56.9%
3827590 2007.5.1.20 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase,PMR5N 0.66 51.0 3.41e-01 81.1% 43.1%
4154256 2011.2.1.3 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro 0.65 50.0 4.01e-01 82.1% 67.4%
3320881 2004.1.1.406 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PC-Esterase 0.65 50.0 4.05e-01 82.1% 88.3%
3956394 2011.2.1.1 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 0.65 51.0 3.69e-01 83.2% 83.1%
5026543 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.65 58.0 4.97e-01 98.9% 65.3%
4289376 2011.2.1.3 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro 0.65 50.0 4.03e-01 83.2% 68.1%
3428250 2007.5.1.20 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase,PMR5N 0.64 50.0 3.39e-01 83.2% 62.6%
3672744 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 49.0 3.76e-01 83.2% 64.9%
3246905 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.64 50.0 4.24e-01 83.2% 79.3%
3891793 2004.1.1.118 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 0.63 52.0 3.92e-01 88.4% 54.7%
5049322 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 49.0 3.92e-01 83.2% 54.7%
4455869 2011.2.1.3 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro 0.63 49.0 3.89e-01 83.2% 65.6%
3798374 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.63 51.0 4.30e-01 86.3% 80.0%
3352485 2007.5.1.17 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase 0.63 48.0 3.56e-01 82.1% 54.9%
3586141 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.63 51.0 4.29e-01 86.3% 80.0%
3592494 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.63 50.0 4.33e-01 85.3% 88.3%
3910119 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.63 51.0 4.14e-01 86.3% 81.2%
5052757 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.63 49.0 3.83e-01 84.2% 76.1%
3652670 316.1.1.1 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol 0.63 55.0 4.44e-01 96.8% 67.2%
3449077 2007.5.1.20 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase,PMR5N 0.62 48.0 3.20e-01 82.1% 38.7%
431522 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.62 50.0 5.12e-01 89.5% 89.2%
3434713 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.61 47.0 4.24e-01 83.2% 89.6%
3464278 211.1.1.49 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Pept_tRNA_hydro 0.61 44.0 4.79e-01 77.9% 97.4%
3509277 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.60 47.0 3.58e-01 83.2% 51.4%
3254676 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.60 46.0 3.78e-01 83.2% 77.2%
4465859 316.1.1.30 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PAP_NTPase 0.60 52.0 4.35e-01 98.9% 67.6%
3715988 7579.1.1.18 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_2 0.60 50.0 3.48e-01 94.7% 67.2%
2132278 2004.1.1.99 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.59 51.0 3.91e-01 95.8% 62.6%
4140035 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.59 51.0 4.51e-01 98.9% 67.6%
5075254 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.59 45.0 3.74e-01 83.2% 61.1%
4337741 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.59 45.0 3.67e-01 83.2% 59.5%
4948009 316.1.1.81 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › tRNA_NucTransf2 0.59 51.0 4.50e-01 100.0% 63.3%
3495243 316.1.1.30 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PAP_NTPase 0.59 51.0 4.15e-01 98.9% 60.5%
5046977 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.59 45.0 3.60e-01 83.2% 57.4%
4028739 316.1.1.30 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PAP_NTPase 0.59 51.0 4.13e-01 98.9% 61.1%
5051236 2004.1.1.119 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA 0.58 45.0 3.65e-01 83.2% 64.9%
3645243 316.1.1.30 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PAP_NTPase 0.58 49.0 4.30e-01 94.7% 64.1%
3399393 7524.1.1.4 a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › DUF1487 0.58 45.0 3.41e-01 84.2% 72.8%
3243872 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.58 43.0 3.10e-01 78.9% 47.5%
4105274 2011.2.1.1 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 0.58 44.0 3.38e-01 83.2% 80.9%
3567876 316.1.1.20 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › OAS1_C 0.57 50.0 4.15e-01 100.0% 71.1%
4041544 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.57 44.0 3.55e-01 83.2% 60.0%
4941640 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.57 48.0 4.09e-01 92.6% 67.7%
3659833 2007.5.1.17 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase 0.57 48.0 3.53e-01 92.6% 63.5%
5048992 2004.1.1.119 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA 0.57 44.0 3.56e-01 83.2% 82.2%
3960628 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.57 44.0 4.69e-01 83.2% 96.5%
1700216 2011.2.1.1 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 0.57 43.0 3.26e-01 82.1% 81.0%
3963015 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.57 44.0 3.88e-01 83.2% 92.9%
5000351 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.56 48.0 4.08e-01 98.9% 60.0%
3285546 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.56 47.0 4.47e-01 90.5% 95.5%
3653809 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.56 40.0 3.82e-01 75.8% 91.3%
3882923 2004.1.1.118 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 0.56 41.0 3.36e-01 78.9% 95.0%
5026193 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.55 38.0 3.38e-01 70.5% 87.4%
4947114 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.54 46.0 3.84e-01 92.6% 57.6%
3485149 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.54 41.0 3.10e-01 83.2% 42.0%
5052080 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 41.0 3.38e-01 83.2% 60.6%
3898006 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 41.0 3.21e-01 83.2% 51.2%
3485304 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.53 41.0 3.01e-01 83.2% 44.8%
5049766 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 45.0 3.26e-01 96.8% 77.3%
3480123 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 42.0 3.34e-01 88.4% 59.5%
3480779 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.52 40.0 3.32e-01 83.2% 68.0%
3927360 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.52 38.0 3.98e-01 77.9% 94.1%
4945194 2004.1.1.119 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA 0.50 42.0 3.53e-01 95.8% 96.0%