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hypothetical_protein_pqer_cds_27
Euk-VirPandoravirus_quercus
hypothetical_protein_pqer_cds_27__YP_009482718__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009482718 ↗
- Protein ID:
- hypothetical_protein_pqer_cds_27
- Kingdom:
- euk
Quality
48.7
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 40-111
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qz4A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 38.0 | 3.87e-01 | 97.2% | 59.4% |
| 1irjA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.65 | 46.0 | 4.38e-01 | 75.0% | 78.8% |
| 2pq7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.60 | 52.0 | 3.99e-01 | 100.0% | 63.6% |
| 2r2iA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 45.0 | 4.32e-01 | 86.1% | 88.5% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.58 | 36.0 | 4.04e-01 | 98.6% | 80.4% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 42.0 | 4.37e-01 | 79.2% | 92.5% |
| 3ikhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 47.0 | 3.23e-01 | 94.4% | 90.2% |
| 2kp6A00 | 1.10.10.1130 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised protein PF10982, DUF2789 | 0.55 | 42.0 | 4.10e-01 | 84.7% | 75.9% |
| 3tw6A06 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 31.0 | 3.37e-01 | 87.5% | 68.5% |
| 2r7dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 34.0 | 3.50e-01 | 72.2% | 65.2% |
| 1jwjA01 | 3.90.340.10 | Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 | 0.53 | 44.0 | 3.46e-01 | 95.8% | 54.4% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.51 | 43.0 | 3.67e-01 | 100.0% | 79.8% |
| 2rreA00 | 1.10.10.2010 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 34.0 | 3.40e-01 | 88.9% | 67.6% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4530474 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.67 | 52.0 | 5.03e-01 | 83.3% | 78.8% |
| 3436659 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.65 | 57.0 | 5.41e-01 | 100.0% | 96.5% |
| 3789516 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.62 | 51.0 | 4.97e-01 | 93.1% | 100.0% |
| 3164063 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.60 | 41.0 | 4.17e-01 | 97.2% | 72.9% |
| 4644218 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.60 | 49.0 | 4.66e-01 | 91.7% | 84.7% |
| 3943829 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.57 | 47.0 | 3.27e-01 | 97.2% | 90.5% |
| 3279420 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.55 | 39.0 | 3.47e-01 | 76.4% | 94.5% |
| 4999401 | 4995.1.1.0 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like | 0.55 | 43.0 | 4.14e-01 | 90.3% | 100.0% |
| 4102250 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.53 | 42.0 | 4.14e-01 | 94.4% | 78.8% |
| 3167402 | 108.1.1.116 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › SAGA-Tad1 | 0.52 | 37.0 | 3.47e-01 | 98.6% | 60.0% |
| 5057476 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.52 | 45.0 | 2.87e-01 | 100.0% | 36.9% |
| 3781595 | 1134.1.1.7 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 | 0.52 | 33.0 | 3.41e-01 | 98.6% | 67.1% |
| 3590191 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.51 | 43.0 | 3.67e-01 | 95.8% | 63.2% |
| 3600118 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.51 | 40.0 | 3.66e-01 | 100.0% | 64.2% |
| 3930038 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.50 | 38.0 | 3.69e-01 | 90.3% | 94.4% |
D2
medium
residues 118-222