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hypothetical_protein_pqer_cds_28

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_28__YP_009482719__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009482719 ↗
Protein ID:
hypothetical_protein_pqer_cds_28
Kingdom:
euk

Quality

75.2 mean pLDDT

Taxonomy

TaxID: 2107709

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 51-238
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19207.6 best DUF5879 241.1 2.10e-71 99.5% 66.7%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.53 20.0 3.12e-01 70.2% 95.0%
3zhaQ02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 31.0 3.63e-01 83.5% 82.4%
4owwB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 28.0 3.59e-01 91.0% 88.8%
2awnC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 19.0 3.11e-01 71.8% 100.0%
4zk3A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 31.0 3.62e-01 83.5% 86.6%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3936037 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 27.0 3.61e-01 88.8% 100.0%
3654541 2.1.1.223 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 0.51 30.0 3.69e-01 92.6% 95.5%
D2 high residues 244-353
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19207.6 best DUF5879 50.6 2.50e-13 52.7% 18.3%
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.75 51.0 5.63e-01 70.0% 100.0%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 45.0 5.32e-01 81.8% 89.6%
1vq8V00 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 42.0 5.41e-01 80.9% 100.0%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.68 48.0 5.38e-01 88.2% 94.1%
3ck6C02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.67 55.0 5.37e-01 86.4% 82.4%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 42.0 4.91e-01 82.7% 93.2%
1fpoC02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.66 47.0 5.06e-01 81.8% 89.0%
4hwhE00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.65 44.0 4.84e-01 85.5% 87.5%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.64 47.0 4.87e-01 81.8% 82.4%
4akgA04 1.20.58.1120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 0.64 51.0 4.49e-01 88.2% 59.0%
4qndA00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.63 43.0 4.53e-01 70.0% 79.4%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 47.0 4.84e-01 80.9% 82.9%
2c2jA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.63 55.0 4.78e-01 95.5% 90.9%
7p3rA01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.62 47.0 3.39e-01 80.0% 79.1%
1quuA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 52.0 5.02e-01 90.9% 79.4%
1ugoA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.61 42.0 4.46e-01 87.3% 78.8%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 49.0 5.07e-01 87.3% 91.3%
3nvoB02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.61 50.0 4.97e-01 86.4% 87.1%
3uo2B02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.61 42.0 4.57e-01 90.0% 91.7%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 48.0 4.98e-01 84.5% 91.1%
1nfvA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.60 49.0 4.24e-01 88.2% 81.1%
4mhlA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.60 48.0 4.24e-01 86.4% 75.2%
5tqbB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 45.0 3.20e-01 87.3% 26.5%
1tjoB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.59 47.0 4.08e-01 87.3% 80.0%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.59 47.0 4.10e-01 85.5% 92.9%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.59 44.0 4.04e-01 80.0% 87.9%
1s3qG00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 48.0 4.20e-01 88.2% 84.0%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 49.0 4.66e-01 95.5% 78.9%
3unoE00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 46.0 4.09e-01 89.1% 78.4%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.57 43.0 4.59e-01 87.3% 91.8%
2l3lA01 1.20.58.1250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain 0.55 35.0 3.59e-01 82.7% 65.1%
1bgfA00 1.10.532.10 Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain 0.55 37.0 3.61e-01 71.8% 62.1%
1bgcA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.54 39.0 3.48e-01 75.5% 71.5%
1sumB02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.54 46.0 4.51e-01 93.6% 88.1%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.54 45.0 3.98e-01 89.1% 63.2%
1dtoA01 1.10.287.30 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 0.52 37.0 3.86e-01 91.8% 80.4%
2b5dX01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.52 42.0 2.87e-01 88.2% 36.9%
5jc3A02 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.51 39.0 3.76e-01 81.8% 92.9%
1rx0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.51 41.0 3.71e-01 88.2% 89.0%
2x6hA03 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.51 38.0 3.22e-01 80.9% 65.0%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3958889 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 50.0 4.26e-01 73.6% 82.4%
4017168 150.1.1.114 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PF30036 0.69 53.0 4.71e-01 80.9% 93.5%
4051951 605.2.1.0 alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 0.68 46.0 5.07e-01 70.0% 100.0%
3257840 6155.1.1.2 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop 0.68 54.0 4.66e-01 83.6% 66.1%
3733145 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.67 53.0 4.91e-01 83.6% 87.9%
4223286 633.23.1.9 alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 0.67 52.0 4.29e-01 81.8% 93.2%
3615244 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.66 54.0 4.69e-01 85.5% 67.5%
3621305 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.66 51.0 4.61e-01 82.7% 86.7%
3755802 604.12.1.98 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › NKAIN 0.65 45.0 4.67e-01 90.0% 75.2%
3770274 603.1.1.198 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF4716 0.65 51.0 5.41e-01 86.4% 94.7%
3991109 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.65 50.0 4.65e-01 82.7% 89.3%
3194196 633.23.1.22 alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.65 50.0 4.64e-01 82.7% 88.6%
3286725 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 47.0 3.99e-01 76.4% 81.1%
3486748 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.63 49.0 5.08e-01 81.8% 87.6%
3472879 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.63 45.0 4.75e-01 89.1% 85.3%
3486401 3807.1.1.0 alpha bundles › Yersinia protein kinase A (YpkA) Rho-GTPase binding domain › Yersinia protein kinase A (YpkA) Rho-GTPase binding domain › Yersinia protein kinase A (YpkA) Rho-GTPase binding domain 0.63 54.0 4.22e-01 91.8% 54.7%
4484289 633.23.1.9 alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 0.63 51.0 4.28e-01 88.2% 94.2%
3934523 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.62 47.0 5.00e-01 88.2% 91.6%
3862749 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.62 50.0 4.80e-01 87.3% 79.2%
3898383 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.62 51.0 4.91e-01 88.2% 81.6%
4947815 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.62 47.0 4.94e-01 80.9% 93.0%
3498827 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.62 48.0 4.87e-01 81.8% 93.6%
3980942 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.62 45.0 4.68e-01 80.9% 82.0%
3808 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.61 50.0 5.12e-01 88.2% 91.5%
4652719 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.61 43.0 4.61e-01 73.6% 100.0%
3505493 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.61 48.0 4.66e-01 87.3% 74.4%
3528346 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.61 49.0 4.33e-01 88.2% 61.8%
3860575 150.3.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Hormone_1 0.60 48.0 3.92e-01 85.5% 68.5%
3935032 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.60 47.0 4.88e-01 84.5% 88.6%
3576455 604.5.1.32 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TMEM120A-B 0.60 48.0 3.73e-01 87.3% 82.4%
3569625 604.12.1.4 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT1 0.59 53.0 4.85e-01 99.1% 83.4%
3215306 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.59 44.0 4.88e-01 77.3% 100.0%
3221127 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.59 46.0 4.10e-01 84.5% 86.9%
4941642 3352.1.1.0 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain 0.59 52.0 3.55e-01 96.4% 35.6%
3269187 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 44.0 3.50e-01 81.8% 55.4%
5063996 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.58 48.0 3.80e-01 90.0% 66.7%
3462720 109.4.1.1186 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF6857 0.58 50.0 4.23e-01 97.3% 55.9%
4979165 601.14.1.1 alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin 0.57 47.0 3.96e-01 88.2% 54.4%
3580282 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.57 47.0 4.63e-01 90.9% 100.0%
4960613 601.14.1.1 alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin 0.56 46.0 3.91e-01 89.1% 60.6%
3237156 604.12.1.4 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT1 0.56 49.0 4.65e-01 99.1% 87.4%
3736709 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.55 45.0 3.67e-01 90.9% 85.9%
3514005 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.55 44.0 3.67e-01 90.0% 71.0%
3730806 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.55 45.0 4.36e-01 90.0% 83.2%
4968943 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.52 34.0 3.81e-01 79.1% 87.1%
4998530 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.50 42.0 3.17e-01 90.9% 73.2%
3908662 109.4.1.1 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 0.50 43.0 3.40e-01 96.4% 80.8%