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hypothetical_protein_pqer_cds_491

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_491__YP_009483182__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483182 ↗
Protein ID:
hypothetical_protein_pqer_cds_491
Kingdom:
euk

Quality

71.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (25 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-154
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lshA03 2.20.50.20 Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 0.74 27.0 3.16e-01 98.5% 45.9%
3ga2A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.58 41.0 3.37e-01 71.9% 85.2%
1yqzA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 29.0 3.25e-01 88.9% 61.1%
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.54 31.0 3.38e-01 100.0% 64.9%
4acvA00 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.54 34.0 3.64e-01 100.0% 72.3%
1fx3B00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.54 41.0 4.01e-01 100.0% 72.5%
3oz2A02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.52 35.0 3.31e-01 90.4% 56.9%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4267962 230.5.1.5 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › FloA 0.71 52.0 5.39e-01 100.0% 81.6%
3435767 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.62 36.0 4.05e-01 97.8% 73.3%
4977105 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.62 44.0 3.30e-01 72.6% 84.5%
3999356 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.62 42.0 4.39e-01 99.3% 75.2%
4984424 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.61 44.0 3.11e-01 72.6% 83.5%
3914552 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.61 49.0 3.29e-01 85.2% 86.5%
4943914 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.60 43.0 3.23e-01 72.6% 94.8%
4976732 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.60 42.0 3.16e-01 71.9% 88.4%
3604122 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.60 42.0 3.17e-01 72.6% 91.3%
5011661 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.59 41.0 3.65e-01 70.4% 96.3%
4980169 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.59 41.0 3.10e-01 71.9% 84.5%
5055339 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.58 37.0 2.98e-01 94.8% 31.1%
5051804 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.58 41.0 2.92e-01 71.9% 78.4%
3241023 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 47.0 3.21e-01 86.7% 86.9%
5056410 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.58 40.0 3.04e-01 70.4% 83.5%
5028422 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.57 40.0 3.14e-01 71.9% 93.7%
4986561 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.55 34.0 3.74e-01 98.5% 76.2%
3939000 212.1.1.17 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › EFG_IV 0.54 39.0 3.86e-01 100.0% 69.0%
433858 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.54 44.0 3.09e-01 87.4% 48.4%
4199388 504.1.1.1 ↗ a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB 0.54 42.0 4.11e-01 99.3% 75.9%
4979678 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.52 36.0 2.74e-01 95.6% 26.3%
5071492 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.52 37.0 2.81e-01 96.3% 28.9%
5052814 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 37.0 2.90e-01 94.8% 36.4%
5007125 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.51 43.0 3.15e-01 90.4% 71.2%
5060223 2484.1.1.43 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.51 36.0 3.09e-01 71.1% 89.3%
5014304 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.51 41.0 2.93e-01 87.4% 53.4%
3992067 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.50 40.0 3.62e-01 100.0% 63.3%
D2 high residues 198-266
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_907__YP_009482517__Pandoravirus_neocaledonia__2107708__D198-265