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hypothetical_protein_pqer_cds_506

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_506__YP_009483197__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483197 ↗
Protein ID:
hypothetical_protein_pqer_cds_506
Kingdom:
euk

Quality

71.3 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (44 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-178
PDB
Domain cluster: rep: hypothetical_protein_pmac_cds_359__YP_009481043__Pandoravirus_macleodensis__2107707__D58-179
D2 high residues 201-362_492-516
PDB
D3 high residues 370-484
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_529__YP_009482139__Pandoravirus_neocaledonia__2107708__D177-292
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a64A01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.61 42.0 4.06e-01 71.3% 88.6%
3b0pA02 1.20.120.1460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.59 38.0 4.44e-01 80.9% 97.3%
4v3iA00 1.25.40.590 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU 0.55 44.0 4.02e-01 87.0% 98.7%
3myvA01 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 41.0 3.35e-01 83.5% 67.9%
8hixR01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 46.0 3.49e-01 100.0% 93.2%
3i1aA03 1.20.58.840 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 37.0 3.73e-01 99.1% 75.0%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3703098 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 42.0 3.71e-01 72.2% 77.1%
3928350 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.58 47.0 3.61e-01 100.0% 38.5%
3489262 196.1.1.1 ↗ alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS 0.56 47.0 4.59e-01 92.2% 88.5%
4998875 141.1.1.1 ↗ alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt 0.55 44.0 3.16e-01 86.1% 77.1%
3638800 611.3.1.1 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 0.54 39.0 3.62e-01 75.7% 89.3%
4927688 3349.1.1.1 ↗ a+b two layers › DNA polymerase D large subunit DP2 N-terminal domain › DNA polymerase D large subunit DP2 N-terminal domain › DNA polymerase D large subunit DP2 N-terminal domain › PolC_DP2 0.52 41.0 3.13e-01 85.2% 65.5%
3710822 2004.1.1.17 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head 0.52 44.0 2.76e-01 93.0% 21.9%
3693144 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 42.0 3.72e-01 90.4% 99.4%
57823 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.52 46.0 3.73e-01 100.0% 93.8%
3274860 109.25.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A 0.51 36.0 3.12e-01 73.9% 56.8%
3699909 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.50 37.0 3.48e-01 76.5% 74.3%
3631533 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.50 39.0 2.84e-01 84.3% 55.6%