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hypothetical_protein_pqer_cds_529
Euk-VirPandoravirus_quercus
hypothetical_protein_pqer_cds_529__YP_009483220__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009483220 ↗
- Protein ID:
- hypothetical_protein_pqer_cds_529
- Kingdom:
- euk
Quality
75.9
mean pLDDT
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-86
D2
medium
residues 276-379
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qmhA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.70 | 62.0 | 4.80e-01 | 100.0% | 51.3% |
| 3qnfA04 | 1.10.3480.20 | Mainly Alpha › Orthogonal Bundle › TorD-like › | 0.69 | 58.0 | 4.85e-01 | 90.4% | 71.2% |
| 4flbA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 60.0 | 5.58e-01 | 100.0% | 84.0% |
| 1r5aA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 48.0 | 4.46e-01 | 81.7% | 91.2% |
| 7dvqK01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.63 | 56.0 | 4.79e-01 | 100.0% | 75.1% |
| 4agsA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 46.0 | 4.30e-01 | 78.8% | 86.7% |
| 1hxiA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 46.0 | 4.52e-01 | 93.3% | 79.5% |
| 5dikA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.52 | 38.0 | 3.76e-01 | 76.9% | 71.4% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.52 | 40.0 | 3.76e-01 | 81.7% | 83.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3185031 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 53.0 | 4.65e-01 | 78.8% | 63.9% |
| 3576126 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.68 | 46.0 | 4.40e-01 | 70.2% | 88.8% |
| 3300278 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.65 | 54.0 | 5.22e-01 | 89.4% | 92.2% |
| 3384147 | 109.4.1.1778 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_GCN1 | 0.65 | 58.0 | 4.61e-01 | 100.0% | 57.7% |
| 3571279 | 109.4.1.80 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRN3 | 0.63 | 55.0 | 4.97e-01 | 97.1% | 94.5% |
| 3642644 | 109.4.1.765 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vac14_Fab1_bd | 0.61 | 54.0 | 4.26e-01 | 100.0% | 64.8% |
| 3394566 | 4205.1.1.7 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › HPF1 | 0.61 | 44.0 | 4.09e-01 | 76.0% | 76.3% |
| 3671612 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.61 | 51.0 | 4.81e-01 | 92.3% | 76.8% |
| 3782887 | 109.4.1.27 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › W2 | 0.59 | 51.0 | 4.47e-01 | 100.0% | 83.6% |
| 5018946 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.55 | 38.0 | 3.13e-01 | 70.2% | 74.9% |
| 4145951 | 199.1.1.2 ↗ | alpha arrays › Guanido kinase-N › Guanido kinase-N › Guanido kinase-N › McsB_C | 0.53 | 36.0 | 3.96e-01 | 85.6% | 85.9% |
| 1769448 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.52 | 39.0 | 3.69e-01 | 78.8% | 68.3% |
| 4933023 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.52 | 38.0 | 3.38e-01 | 76.9% | 60.0% |
| 3606406 | 1056.1.1.0 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain | 0.52 | 37.0 | 2.85e-01 | 74.0% | 35.3% |