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hypothetical_protein_pqer_cds_5
Euk-VirPandoravirus_quercus
hypothetical_protein_pqer_cds_5__YP_009482696__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009482696 ↗
- Protein ID:
- hypothetical_protein_pqer_cds_5
- Kingdom:
- euk
Quality
59.1
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-78_101-126
D2
medium
residues 127-154_179-287
Domain cluster:
rep: hypothetical_protein_pdul_cds_913__YP_008319819__Pandoravirus_dulcis__1349409__D102-203
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4akgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.57 | 43.0 | 4.14e-01 | 97.8% | 69.2% |
| 1i36A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 28.0 | 3.31e-01 | 91.2% | 65.7% |
| 2ox6D00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.56 | 40.0 | 3.81e-01 | 92.7% | 61.5% |
| 2zy9A03 | 1.10.357.20 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › SLC41 divalent cation transporters, integral membrane domain | 0.55 | 39.0 | 3.58e-01 | 71.5% | 87.9% |
| 2l6xA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 38.0 | 3.25e-01 | 70.8% | 60.4% |
| 2fsfB04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.55 | 41.0 | 3.58e-01 | 78.8% | 82.1% |
| 2pgsA03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.52 | 33.0 | 3.80e-01 | 73.7% | 87.6% |
| 2ys8A00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.50 | 25.0 | 3.11e-01 | 75.9% | 73.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3711195 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.61 | 40.0 | 4.40e-01 | 79.6% | 81.8% |
| 3588332 | 5069.1.1.23 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF2798 | 0.59 | 40.0 | 3.99e-01 | 78.8% | 67.1% |
| 4313432 | 148.1.3.203 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF28760 | 0.56 | 45.0 | 4.54e-01 | 95.6% | 83.6% |
| 3799258 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.56 | 41.0 | 3.71e-01 | 94.2% | 56.2% |
| 4004467 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.56 | 43.0 | 4.18e-01 | 100.0% | 72.3% |
| 3789006 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.54 | 49.0 | 3.79e-01 | 100.0% | 76.8% |
| 3597232 | 5076.1.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier | 0.53 | 47.0 | 3.72e-01 | 100.0% | 78.0% |
| 4932856 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.52 | 46.0 | 3.46e-01 | 94.9% | 62.8% |
| 4008895 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.51 | 40.0 | 3.62e-01 | 100.0% | 62.0% |
| 3614022 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.51 | 43.0 | 3.48e-01 | 93.4% | 97.4% |