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hypothetical_protein_pqer_cds_620
Euk-VirPandoravirus_quercus
hypothetical_protein_pqer_cds_620__YP_009483311__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009483311 ↗
- Protein ID:
- hypothetical_protein_pqer_cds_620
- Kingdom:
- euk
Quality
72.6
mean pLDDT
Cluster
View cluster (60 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 67-120_255-320
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bszB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.79 | 74.0 | 6.78e-01 | 99.2% | 94.0% |
| 2ajaA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.79 | 73.0 | 5.16e-01 | 100.0% | 61.5% |
| 1wdyA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.78 | 73.0 | 5.34e-01 | 98.3% | 46.7% |
| 4uucA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.77 | 72.0 | 5.72e-01 | 98.3% | 57.5% |
| 5eidA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.75 | 69.0 | 6.89e-01 | 98.3% | 99.2% |
| 1qymA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.74 | 68.0 | 5.44e-01 | 98.3% | 69.1% |
| 1ihbA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.73 | 67.0 | 6.07e-01 | 97.5% | 78.2% |
| 4cymD00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.73 | 67.0 | 5.95e-01 | 99.2% | 94.6% |
| 6fbtA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.63 | 36.0 | 4.35e-01 | 93.3% | 88.2% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 51.0 | 4.21e-01 | 100.0% | 82.9% |
| 8el7B01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 48.0 | 3.52e-01 | 100.0% | 68.3% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.54 | 29.0 | 3.20e-01 | 70.8% | 61.0% |
| 4j8sA00 | 1.25.40.840 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain | 0.54 | 47.0 | 4.18e-01 | 100.0% | 83.3% |
| 5fq4A00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 46.0 | 3.18e-01 | 100.0% | 59.6% |
| 1zu2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 43.0 | 3.98e-01 | 91.7% | 80.4% |
| 1gu9C00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.50 | 39.0 | 3.53e-01 | 86.7% | 58.9% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4306725 | 109.3.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 | 0.83 | 73.0 | 5.53e-01 | 98.3% | 43.1% |
| 3252035 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.81 | 73.0 | 6.58e-01 | 100.0% | 71.9% |
| 3909281 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.80 | 74.0 | 6.30e-01 | 98.3% | 71.9% |
| 3268647 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.79 | 74.0 | 5.69e-01 | 100.0% | 65.2% |
| 4663551 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.77 | 71.0 | 4.25e-01 | 98.3% | 15.7% |
| 4011282 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.76 | 70.0 | 5.51e-01 | 98.3% | 66.1% |
| 4018105 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.75 | 70.0 | 6.31e-01 | 100.0% | 83.1% |
| 3669348 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.74 | 66.0 | 5.88e-01 | 100.0% | 69.1% |
| 3887553 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.74 | 68.0 | 5.61e-01 | 98.3% | 61.5% |
| 3296087 | 109.3.1.205 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF28612 | 0.73 | 66.0 | 5.41e-01 | 100.0% | 58.2% |
| 3721073 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.72 | 65.0 | 6.31e-01 | 98.3% | 88.9% |
| 3843267 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.72 | 66.0 | 6.16e-01 | 98.3% | 93.1% |
| 3437396 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.71 | 64.0 | 5.49e-01 | 100.0% | 68.4% |
| 3257294 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.70 | 64.0 | 5.33e-01 | 100.0% | 62.9% |
| 3260767 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 63.0 | 4.06e-01 | 98.3% | 32.4% |
| 4542889 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.69 | 63.0 | 4.94e-01 | 100.0% | 54.0% |
| 3259949 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.69 | 62.0 | 5.48e-01 | 100.0% | 84.6% |
| 3257073 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.68 | 59.0 | 5.61e-01 | 100.0% | 80.0% |
| 3254419 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.67 | 60.0 | 4.80e-01 | 98.3% | 65.1% |
| 3665948 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.65 | 58.0 | 5.52e-01 | 100.0% | 90.3% |
| 3300366 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 57.0 | 5.27e-01 | 100.0% | 83.2% |
| 3931155 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 57.0 | 4.13e-01 | 100.0% | 41.2% |
| 3464179 | 109.4.1.2576 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4 | 0.62 | 55.0 | 4.38e-01 | 100.0% | 83.7% |
| 3825885 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.60 | 52.0 | 4.84e-01 | 100.0% | 76.1% |
| 3449227 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.59 | 52.0 | 3.67e-01 | 100.0% | 30.5% |
| 3297097 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.58 | 43.0 | 4.58e-01 | 79.2% | 90.5% |
| 3320046 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.56 | 49.0 | 4.81e-01 | 100.0% | 91.5% |
| 3425172 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.56 | 49.0 | 4.67e-01 | 100.0% | 82.8% |
| 3368917 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.56 | 47.0 | 4.50e-01 | 96.7% | 80.7% |
| 3805784 | 109.4.1.3484 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, E_motif | 0.56 | 49.0 | 4.42e-01 | 100.0% | 72.4% |
| 3451139 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.55 | 48.0 | 4.34e-01 | 100.0% | 83.4% |
| 4945501 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 46.0 | 3.93e-01 | 98.3% | 58.8% |
D2
medium
residues 365-504
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5eidA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.72 | 47.0 | 5.01e-01 | 99.3% | 74.8% |
| 1dcqA02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.59 | 47.0 | 4.58e-01 | 90.7% | 74.5% |
| 5aarA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.59 | 48.0 | 4.35e-01 | 100.0% | 65.4% |
| 1n11A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.58 | 49.0 | 3.43e-01 | 100.0% | 30.4% |
| 4l9pA00 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.57 | 43.0 | 3.30e-01 | 100.0% | 33.4% |
| 3sl9B00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.51 | 43.0 | 4.10e-01 | 100.0% | 77.0% |
| 2ff4A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 38.0 | 3.55e-01 | 78.6% | 78.6% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3571996 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.75 | 50.0 | 5.35e-01 | 99.3% | 77.5% |
| 4289174 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.74 | 48.0 | 4.63e-01 | 99.3% | 58.1% |
| 3491174 | 109.3.1.164 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 | 0.73 | 48.0 | 4.62e-01 | 100.0% | 58.1% |
| 3555969 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.70 | 49.0 | 5.24e-01 | 100.0% | 83.3% |
| 3254298 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.69 | 49.0 | 4.12e-01 | 100.0% | 43.6% |
| 3755643 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.68 | 48.0 | 4.98e-01 | 100.0% | 76.9% |
| 4593325 | 109.3.1.164 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 | 0.68 | 48.0 | 4.87e-01 | 100.0% | 72.1% |
| 3460877 | 109.3.1.164 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 | 0.67 | 44.0 | 4.63e-01 | 85.7% | 72.3% |
| 3969259 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.64 | 43.0 | 4.14e-01 | 95.7% | 60.0% |
| 3264767 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.60 | 42.0 | 4.18e-01 | 100.0% | 69.7% |
| 3302799 | 109.4.1.1374 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, TPR_24 | 0.59 | 41.0 | 4.08e-01 | 95.7% | 67.3% |
| 3736150 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.57 | 48.0 | 4.36e-01 | 100.0% | 67.0% |
| 3729151 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 50.0 | 3.10e-01 | 100.0% | 27.7% |
| 4190643 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.52 | 41.0 | 2.94e-01 | 83.6% | 75.8% |
| 3990519 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 46.0 | 4.54e-01 | 97.9% | 96.0% |
D3
medium
residues 505-577
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rlyA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.74 | 65.0 | 4.28e-01 | 100.0% | 25.6% |
| 3uxgA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.72 | 63.0 | 4.90e-01 | 100.0% | 66.9% |
| 2dznA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.70 | 62.0 | 4.40e-01 | 100.0% | 36.7% |
| 1qymA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.70 | 61.0 | 4.35e-01 | 100.0% | 35.4% |
| 4hi8A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.69 | 59.0 | 4.60e-01 | 100.0% | 64.7% |
| 3pubA01 | 1.10.10.2400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain | 0.66 | 50.0 | 5.05e-01 | 83.6% | 93.2% |
| 5m9dA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 52.0 | 4.38e-01 | 100.0% | 69.6% |
| 3sqiA01 | 1.10.150.540 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.57 | 43.0 | 3.99e-01 | 84.9% | 78.8% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.57 | 43.0 | 3.97e-01 | 84.9% | 85.0% |
| 4rg9B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 49.0 | 3.80e-01 | 100.0% | 53.9% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.55 | 37.0 | 3.00e-01 | 71.2% | 72.7% |
| 2l6hA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.51 | 35.0 | 2.87e-01 | 72.6% | 55.2% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 43.0 | 3.80e-01 | 97.3% | 88.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3728888 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.73 | 65.0 | 4.56e-01 | 100.0% | 61.3% |
| 3260807 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.73 | 63.0 | 4.30e-01 | 100.0% | 27.3% |
| 3254820 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.72 | 63.0 | 5.17e-01 | 100.0% | 55.6% |
| 4929949 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.70 | 51.0 | 4.86e-01 | 78.1% | 90.6% |
| 3826266 | 109.4.1.1308 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, TPR_24 | 0.67 | 58.0 | 4.15e-01 | 100.0% | 34.7% |
| 4014520 | 109.4.1.72 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C | 0.62 | 54.0 | 4.41e-01 | 100.0% | 51.4% |
| 3432915 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 51.0 | 3.84e-01 | 98.6% | 57.0% |
| 3298577 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.56 | 46.0 | 3.90e-01 | 100.0% | 55.2% |
| 3503526 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.55 | 39.0 | 3.85e-01 | 76.7% | 97.5% |
| 3676604 | 109.46.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH | 0.51 | 42.0 | 3.65e-01 | 98.6% | 76.2% |
D4
medium
residues 578-673
Domain cluster:
rep: F-box_incomplete_domain_containing_protein__YP_009482731__Pandoravirus_quercus__2107709__D462-550
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bszB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.77 | 70.0 | 5.97e-01 | 100.0% | 85.3% |
| 2zgdA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.73 | 57.0 | 5.70e-01 | 82.3% | 91.8% |
| 7kb2B01 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.72 | 64.0 | 5.25e-01 | 100.0% | 68.4% |
| 3ljnA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.69 | 61.0 | 4.31e-01 | 100.0% | 37.8% |
| 3mkqB00 | 1.25.40.470 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 48.0 | 4.06e-01 | 99.0% | 48.6% |
| 3fflA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 46.0 | 4.33e-01 | 100.0% | 94.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3267273 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.79 | 72.0 | 6.78e-01 | 100.0% | 84.3% |
| 4027102 | 109.4.1.362 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1,TPR_8 | 0.59 | 49.0 | 3.81e-01 | 93.8% | 71.1% |
| 4994184 | 2486.1.1.24 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD_membrane | 0.58 | 46.0 | 3.22e-01 | 86.5% | 38.4% |