←Back to structures
hypothetical_protein_pqer_cds_677
Euk-VirPandoravirus_quercus
hypothetical_protein_pqer_cds_677__YP_009483368__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009483368 ↗
- Protein ID:
- hypothetical_protein_pqer_cds_677
- Kingdom:
- euk
Quality
74.1
mean pLDDT
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 243-310
D2
medium
residues 25-87
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lwdA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.63 | 46.0 | 2.82e-01 | 76.2% | 86.2% |
| 3vw7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 52.0 | 3.35e-01 | 100.0% | 38.7% |
| 3venA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 47.0 | 3.19e-01 | 87.3% | 45.6% |
| 3hkoA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.55 | 42.0 | 2.86e-01 | 82.5% | 35.8% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3614864 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.76 | 45.0 | 3.12e-01 | 71.4% | 20.8% |
| None | — | 0.66 | 55.0 | 3.35e-01 | 90.5% | 42.1% | |
| 3273589 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.66 | 51.0 | 3.27e-01 | 82.5% | 39.0% |
| 4525886 | 109.4.1.1360 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CBF, NOC3p | 0.66 | 56.0 | 3.20e-01 | 92.1% | 47.1% |
| None | — | 0.65 | 53.0 | 3.24e-01 | 88.9% | 40.7% | |
| 5016571 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.61 | 50.0 | 3.26e-01 | 90.5% | 95.8% |
| 3627795 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 42.0 | 3.79e-01 | 76.2% | 97.6% |
| 3839446 | 2002.1.1.52 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 | 0.58 | 45.0 | 2.85e-01 | 82.5% | 75.7% |
| 3740226 | 5051.1.1.7 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Nramp | 0.58 | 50.0 | 3.02e-01 | 98.4% | 38.9% |
| 3415649 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 36.0 | 2.50e-01 | 71.4% | 67.4% |
| 4937952 | 206.1.3.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N | 0.51 | 36.0 | 2.34e-01 | 73.0% | 50.4% |
D3
medium
residues 111-227