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hypothetical_protein_pqer_cds_679

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_679__YP_009483370__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483370 ↗
Protein ID:
hypothetical_protein_pqer_cds_679
Kingdom:
euk

Quality

73.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (25 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 19-72_131-200_214-234
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2imjD01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.80 30.0 3.09e-01 84.8% 35.9%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.74 26.0 4.47e-01 86.9% 100.0%
4k7rA02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.63 30.0 4.12e-01 93.1% 87.0%
7vhqU01 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.62 45.0 5.16e-01 82.8% 98.2%
2rpbA00 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.60 43.0 4.79e-01 83.4% 94.7%
4puxA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.58 32.0 3.11e-01 93.8% 48.4%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 40.0 3.98e-01 100.0% 74.3%
2zuoA10 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.54 41.0 4.56e-01 80.7% 100.0%
3of6E00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 35.0 4.02e-01 100.0% 95.2%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.52 27.0 2.87e-01 100.0% 53.6%
5tseA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.52 30.0 3.17e-01 97.2% 61.0%
5n9bA01 2.60.40.2160 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 0.50 33.0 3.37e-01 100.0% 67.2%
3hrdB01 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.50 39.0 3.81e-01 89.0% 73.2%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4649099 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.62 46.0 4.60e-01 84.8% 74.0%
3391818 3070.2.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain 0.62 30.0 3.55e-01 95.2% 65.7%
3253337 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.60 44.0 4.93e-01 86.9% 95.7%
3700069 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.60 45.0 4.96e-01 86.9% 96.5%
4977988 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.60 45.0 4.70e-01 87.6% 83.7%
4932838 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.60 45.0 4.95e-01 87.6% 94.2%
5058343 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.60 47.0 5.08e-01 87.6% 95.2%
3605179 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.60 46.0 4.41e-01 87.6% 70.3%
3523996 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.60 45.0 5.01e-01 87.6% 98.3%
3599340 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.60 46.0 4.80e-01 87.6% 85.9%
3700023 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.60 45.0 4.93e-01 86.9% 94.2%
3597939 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.59 45.0 4.77e-01 87.6% 87.7%
3312228 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.59 46.0 4.77e-01 87.6% 85.9%
5057792 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.59 38.0 4.67e-01 82.8% 100.0%
3289226 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.59 45.0 4.98e-01 82.8% 98.3%
5028291 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.59 37.0 4.55e-01 80.7% 96.8%
3355174 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.59 45.0 4.87e-01 87.6% 95.0%
4460725 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.59 38.0 4.61e-01 82.8% 100.0%
5010097 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.58 44.0 4.91e-01 82.8% 98.3%
3333427 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.58 44.0 4.10e-01 87.6% 63.3%
4946531 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.58 47.0 5.01e-01 87.6% 96.8%
5012808 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.58 46.0 4.62e-01 87.6% 80.7%
4947843 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.58 45.0 4.88e-01 86.9% 94.4%
4970323 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.57 45.0 4.85e-01 86.9% 95.2%
5058702 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.56 44.0 4.55e-01 83.4% 88.1%
4025984 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.55 43.0 4.67e-01 81.4% 96.7%
3728098 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.55 46.0 4.59e-01 87.6% 94.0%
3213779 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.55 36.0 4.13e-01 85.5% 91.4%
1168678 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.52 21.0 3.16e-01 81.4% 91.4%
3718698 230.5.1.2 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.52 42.0 3.30e-01 86.2% 42.7%
D2 medium residues 106-130_235-306
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_907__YP_009482517__Pandoravirus_neocaledonia__2107708__D198-265