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hypothetical_protein_pqer_cds_696

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_696__YP_009483387__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483387 ↗
Protein ID:
hypothetical_protein_pqer_cds_696
Kingdom:
euk

Quality

71.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-98
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2looA02 1.10.10.1740 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like 0.54 35.0 3.82e-01 99.0% 82.7%
3n71A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 40.0 3.08e-01 79.2% 46.0%
1qd1B02 3.30.70.670 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain 0.51 35.0 3.14e-01 70.8% 95.2%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.51 38.0 3.76e-01 99.0% 75.8%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4975294 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.64 41.0 4.31e-01 76.0% 70.0%
4972207 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.64 40.0 4.21e-01 70.8% 68.9%
4998688 192.2.1.89 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF7121 0.61 36.0 2.66e-01 79.2% 23.3%
3705411 109.4.1.777 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 44.0 2.96e-01 80.2% 40.3%
4467849 109.4.1.3080 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29795 0.58 43.0 3.79e-01 77.1% 85.9%
3682606 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.57 43.0 2.56e-01 79.2% 63.0%
3599658 3860.1.1.1 ↗ alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › IQ 0.57 45.0 2.95e-01 84.4% 46.3%
3939646 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 45.0 2.67e-01 88.5% 43.1%
3368459 109.4.1.777 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 48.0 3.08e-01 92.7% 39.8%
3273348 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.55 42.0 2.40e-01 80.2% 44.0%
3677853 109.4.1.1529 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3_p135, TPR_12 0.54 46.0 2.76e-01 96.9% 48.0%
3691078 109.4.1.194 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 0.54 46.0 3.07e-01 97.9% 34.9%
3247410 3324.1.1.2 ↗ extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases 0.53 39.0 3.64e-01 76.0% 77.5%
None — 0.52 44.0 2.58e-01 88.5% 16.2%
3802089 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.52 32.0 3.49e-01 77.1% 73.8%
3750625 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 41.0 3.13e-01 83.3% 49.8%
3940557 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.50 39.0 3.54e-01 100.0% 60.8%
3718104 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 44.0 2.70e-01 96.9% 24.5%