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hypothetical_protein_pqer_cds_702

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_702__YP_009483393__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483393 ↗
Protein ID:
hypothetical_protein_pqer_cds_702
Kingdom:
euk

Quality

75.5 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-138
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_701__YP_009483392__Pandoravirus_quercus__2107709__D35-134
D2 high residues 143-229
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rh3A01 1.20.120.930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 0.61 45.0 3.90e-01 78.2% 79.7%
2k3qA00 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.59 47.0 4.26e-01 100.0% 64.4%
4cpgA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.59 38.0 4.14e-01 79.3% 82.6%
2j49A00 1.25.40.500 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain 0.57 51.0 4.44e-01 100.0% 88.1%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.57 42.0 3.82e-01 77.0% 72.8%
1sj8A02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.56 51.0 4.53e-01 98.9% 83.6%
2gscC00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.56 48.0 4.48e-01 100.0% 77.3%
4p9tA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.56 46.0 4.08e-01 86.2% 63.3%
4o1jA00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.56 38.0 2.94e-01 71.3% 36.0%
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.54 41.0 3.98e-01 80.5% 85.3%
1ciyA01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.54 44.0 3.45e-01 96.6% 81.4%
1dw9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 40.0 4.02e-01 94.3% 81.6%
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.52 41.0 3.17e-01 86.2% 82.1%
3jsbA01 1.20.1440.300 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain 0.51 37.0 3.81e-01 98.9% 82.7%
5d6oA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 44.0 3.01e-01 100.0% 78.8%
3axjB01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.51 38.0 3.22e-01 80.5% 49.0%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.50 39.0 3.60e-01 89.7% 94.4%
4s3mB02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.50 44.0 4.15e-01 97.7% 87.7%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4001485 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.59 48.0 4.06e-01 87.4% 88.6%
3955867 148.1.3.251 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF30647 0.59 40.0 4.36e-01 96.6% 88.6%
3837777 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.58 43.0 4.04e-01 80.5% 64.8%
3970537 5050.1.1.20 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_4 0.58 47.0 3.67e-01 90.8% 71.3%
3675135 5059.1.1.3 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT 0.57 47.0 3.29e-01 98.9% 26.1%
3493291 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 43.0 3.47e-01 80.5% 44.1%
5039836 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.56 37.0 2.76e-01 100.0% 24.7%
54287 633.10.1.0 ↗ alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like 0.55 48.0 4.43e-01 100.0% 77.4%
3362002 5059.1.1.3 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT 0.55 48.0 3.32e-01 100.0% 62.8%
3193406 601.1.2.107 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Tcp11 0.55 49.0 3.36e-01 100.0% 30.6%
3318980 5059.1.1.3 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT 0.55 45.0 3.18e-01 98.9% 26.6%
3972769 5059.1.1.1 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.54 46.0 3.35e-01 98.9% 66.9%
3973066 5059.1.1.0 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter 0.54 45.0 3.33e-01 100.0% 67.1%
5076670 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.53 38.0 3.37e-01 83.9% 49.6%
3244235 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.52 45.0 4.34e-01 100.0% 89.0%
5031064 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.52 41.0 3.92e-01 95.4% 73.0%
4948074 5059.1.1.0 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter 0.52 45.0 3.13e-01 100.0% 65.5%
3940620 5059.1.1.3 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT 0.52 43.0 3.04e-01 100.0% 26.0%
3510163 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.52 38.0 3.62e-01 80.5% 69.1%
2814929 150.1.1.14 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › EncFtn-like 0.52 36.0 3.83e-01 72.4% 94.1%
3987612 162.1.1.1 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.52 38.0 3.64e-01 100.0% 68.0%
3832769 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.51 39.0 3.30e-01 82.8% 55.5%
3839894 180.1.1.1 ↗ alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 0.51 44.0 3.39e-01 100.0% 45.0%
4955330 148.1.3.409 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › BrxL_ATPase 0.51 33.0 3.85e-01 85.1% 98.3%
4387541 5050.1.1.23 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › CLN3 0.50 41.0 3.17e-01 92.0% 62.0%
3285239 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.50 40.0 3.21e-01 90.8% 68.7%
3929377 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.50 35.0 3.61e-01 86.2% 77.6%
3855165 604.6.1.65 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT, GGA_N-GAT 0.50 36.0 3.32e-01 80.5% 58.5%
3787103 1203.1.2.0 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.50 38.0 3.38e-01 85.1% 72.9%
5041443 5059.1.1.1 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.50 43.0 3.09e-01 100.0% 30.0%