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hypothetical_protein_pqer_cds_762

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_762__YP_009483453__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483453 ↗
Protein ID:
hypothetical_protein_pqer_cds_762
Kingdom:
euk

Quality

68.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 79-154
PDB
Domain cluster: rep: hypothetical_protein_pmac_cds_463__YP_009481147__Pandoravirus_macleodensis__2107707__D140-197
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4it4A02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.58 52.0 4.93e-01 100.0% 92.3%
1bpoA02 1.25.40.30 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 44.0 3.61e-01 89.5% 43.2%
2e52B01 3.40.91.70 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Type II restriction endonuclease, HindIII 0.56 48.0 3.52e-01 97.4% 74.6%
2qbyA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 45.0 3.50e-01 92.1% 78.6%
2lo6A00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 47.0 3.78e-01 98.7% 56.5%
2ppqA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.54 41.0 2.96e-01 81.6% 58.9%
1pujA02 1.10.1580.10 Mainly Alpha › Orthogonal Bundle › Conserved Hypothetical Protein Ylqf; Chain: A; domain 2 › 0.51 40.0 3.81e-01 89.5% 98.9%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.51 41.0 3.83e-01 92.1% 91.2%
2ra1A01 1.20.58.790 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 40.0 3.82e-01 93.4% 100.0%
1f2eA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.50 41.0 3.74e-01 93.4% 82.1%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3787916 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 58.0 5.24e-01 75.0% 75.0%
3733418 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.71 63.0 4.49e-01 100.0% 86.4%
3900498 109.4.1.2893 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FANCI_S1-cap, FANCI_S1 0.68 52.0 3.99e-01 80.3% 65.3%
3523576 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 56.0 5.46e-01 98.7% 92.9%
5083349 601.15.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Proteasome activator reg(alpha) › Proteasome activator reg(alpha) 0.60 43.0 3.88e-01 76.3% 80.9%
4928624 1075.1.2.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.59 40.0 3.16e-01 71.1% 92.6%
3926402 639.2.1.0 ↗ alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.57 36.0 3.58e-01 86.8% 61.3%
3591905 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.54 36.0 3.15e-01 76.3% 44.3%
3956796 101.1.2.49 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.54 41.0 3.19e-01 84.2% 57.3%
3702967 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.54 47.0 3.54e-01 98.7% 76.4%
3271959 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.54 45.0 4.21e-01 93.4% 89.5%
4056158 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.53 46.0 4.08e-01 96.1% 80.0%
3734058 604.6.1.1 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT 0.53 46.0 4.21e-01 100.0% 89.5%
4941262 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.52 44.0 4.05e-01 96.1% 85.4%
2651169 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.52 45.0 3.77e-01 96.1% 82.3%
3629868 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.52 40.0 2.34e-01 88.2% 49.8%
None — 0.52 41.0 2.37e-01 89.5% 51.6%
3695361 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.52 44.0 3.80e-01 96.1% 85.6%
3223911 2003.1.1.155 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3HCDH_N, F420_oxidored 0.52 40.0 3.04e-01 86.8% 34.0%
3186004 604.6.1.1 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT 0.51 44.0 4.04e-01 96.1% 90.0%
4331100 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.51 43.0 4.05e-01 96.1% 95.8%
4397328 604.10.1.1 ↗ alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA 0.51 41.0 3.69e-01 90.8% 82.7%
D2 medium residues 171-265
PDB
D3 medium residues 266-424
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp1026__YP_009119995__Pandoravirus_inopinatum__1605721__D192-256_273-350