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hypothetical_protein_pqer_cds_791
Euk-VirPandoravirus_quercus
hypothetical_protein_pqer_cds_791__YP_009483482__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009483482 ↗
- Protein ID:
- hypothetical_protein_pqer_cds_791
- Kingdom:
- euk
Quality
57.5
mean pLDDT
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 99-163_278-289_323-386
Domain cluster:
rep: hypothetical_protein_pneo_cds_682__YP_009482292__Pandoravirus_neocaledonia__2107708__D151-176_201-319
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19072.6 best | DUF5768 | 48.1 | 1.30e-12 | 31.2% | 36.6% |
D2
medium
residues 602-639_655-671_776-820
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3viqA00 | 6.10.140.1020 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 32.0 | 2.98e-01 | 100.0% | 35.2% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.56 | 39.0 | 3.88e-01 | 73.0% | 74.1% |
| 3fh1A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 40.0 | 3.80e-01 | 81.0% | 92.6% |
| 3b8pA00 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.52 | 45.0 | 3.62e-01 | 99.0% | 77.3% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 37.0 | 3.82e-01 | 84.0% | 78.9% |
| 3w1hA01 | 3.90.1150.110 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.52 | 35.0 | 2.88e-01 | 90.0% | 36.5% |
| 1pu1A00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.51 | 37.0 | 3.83e-01 | 75.0% | 87.9% |
| 2xefA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.50 | 42.0 | 3.02e-01 | 93.0% | 91.4% |
| 3w9iA06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.50 | 41.0 | 4.09e-01 | 87.0% | 87.3% |
| 3cjlA00 | 3.10.20.850 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 | 0.50 | 31.0 | 3.35e-01 | 75.0% | 71.6% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4508852 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.67 | 55.0 | 5.28e-01 | 89.0% | 94.8% |
| 3170622 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.63 | 37.0 | 2.18e-01 | 100.0% | 6.7% |
| 3963091 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.58 | 32.0 | 3.97e-01 | 82.0% | 94.5% |
| 4105404 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.57 | 35.0 | 3.38e-01 | 82.0% | 52.2% |
| 2774342 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 31.0 | 3.75e-01 | 94.0% | 87.7% |
| 2141718 | 283.2.1.3 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › VipB_2 | 0.57 | 38.0 | 3.57e-01 | 97.0% | 55.2% |
| 1512995 | 283.2.1.3 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › VipB_2 | 0.56 | 38.0 | 3.51e-01 | 97.0% | 54.4% |
| 4981316 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.56 | 41.0 | 3.26e-01 | 77.0% | 65.0% |
| 2123856 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.55 | 46.0 | 4.56e-01 | 93.0% | 91.5% |
| 3962577 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.54 | 33.0 | 3.82e-01 | 78.0% | 87.1% |
| 4114958 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.54 | 41.0 | 3.33e-01 | 89.0% | 41.5% |
| 4976198 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.54 | 37.0 | 4.03e-01 | 77.0% | 84.7% |
| 2502610 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.54 | 34.0 | 3.48e-01 | 84.0% | 65.3% |
| 4563846 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.53 | 44.0 | 4.41e-01 | 90.0% | 89.0% |
| 2907089 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.52 | 37.0 | 3.57e-01 | 97.0% | 65.2% |
| 3284357 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.52 | 36.0 | 3.34e-01 | 72.0% | 91.5% |
| 5074889 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.52 | 36.0 | 3.77e-01 | 78.0% | 77.9% |
| 3305599 | 304.55.1.20 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Helitron_like_N, REP_ORF2-G2P | 0.52 | 40.0 | 4.22e-01 | 86.0% | 92.2% |
| 3834400 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.51 | 30.0 | 3.57e-01 | 91.0% | 100.0% |
| 4946 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.51 | 37.0 | 3.83e-01 | 75.0% | 87.9% |
| 4993017 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.51 | 36.0 | 3.68e-01 | 73.0% | 83.2% |
| 5082213 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.51 | 41.0 | 4.32e-01 | 88.0% | 97.8% |
| 5014476 | 241.1.1.28 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF4268 | 0.50 | 42.0 | 3.78e-01 | 93.0% | 100.0% |
| 5072826 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.50 | 35.0 | 3.74e-01 | 76.0% | 83.1% |
D3
medium
residues 684-775