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hypothetical_protein_pqer_cds_825

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_825__YP_009483516__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483516 ↗
Protein ID:
hypothetical_protein_pqer_cds_825
Kingdom:
euk

Quality

78.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-55
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12937.13 best F-box-like 26.5 6.10e-06 85.5% 89.4%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mhyG01 1.20.1280.10 Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 1 0.74 56.0 5.23e-01 81.8% 91.2%
8gpsA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.63 52.0 4.33e-01 96.4% 85.7%
5nl6A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 42.0 3.58e-01 92.7% 89.8%
2vtyA00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.55 42.0 3.31e-01 92.7% 45.8%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3698443 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 60.0 6.27e-01 76.4% 82.0%
2860146 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 63.0 6.50e-01 83.6% 83.0%
3636480 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 61.0 6.57e-01 87.3% 100.0%
3299681 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 61.0 6.37e-01 81.8% 90.0%
3999567 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 69.0 5.84e-01 96.4% 86.7%
3643363 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 55.0 6.07e-01 74.5% 100.0%
3354858 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 54.0 5.99e-01 81.8% 100.0%
4446417 145.1.1.31 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › PF29466 0.79 60.0 6.20e-01 83.6% 90.0%
3916304 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 69.0 5.88e-01 100.0% 92.2%
3683657 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.78 59.0 5.10e-01 81.8% 54.1%
3685791 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 65.0 6.60e-01 94.5% 100.0%
3422636 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 53.0 5.82e-01 72.7% 93.3%
3826138 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.77 66.0 3.84e-01 94.5% 23.8%
3448206 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 62.0 6.22e-01 94.5% 90.9%
3727492 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 58.0 6.29e-01 83.6% 100.0%
3309226 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 62.0 4.91e-01 92.7% 86.1%
3725732 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 62.0 5.60e-01 96.4% 91.3%
3319774 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 65.0 5.86e-01 96.4% 100.0%
3193842 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.75 64.0 5.00e-01 100.0% 46.4%
3730335 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.75 61.0 6.32e-01 90.9% 100.0%
4021336 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.74 57.0 5.53e-01 81.8% 76.7%
3473623 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 64.0 5.60e-01 98.2% 94.1%
3524044 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 56.0 5.98e-01 83.6% 100.0%
3640174 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.74 60.0 5.47e-01 92.7% 66.7%
3423604 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 55.0 5.70e-01 83.6% 88.0%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.74 62.0 5.55e-01 94.5% 100.0%
3658111 145.1.1.26 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › LRR_6, DUF7885 0.74 62.0 3.44e-01 90.9% 81.8%
3730967 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 65.0 5.24e-01 100.0% 81.0%
3390129 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.73 64.0 4.18e-01 98.2% 34.6%
3698257 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 61.0 5.47e-01 96.4% 95.0%
3694013 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 62.0 5.19e-01 100.0% 55.0%
3728200 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 56.0 5.31e-01 90.9% 70.0%
4012180 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.72 61.0 4.67e-01 100.0% 57.9%
3924438 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.72 61.0 6.13e-01 92.7% 92.7%
3465963 145.1.1.40 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › LRR_At5g56370 0.72 62.0 3.50e-01 100.0% 17.2%
3254943 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.72 57.0 5.98e-01 89.1% 98.0%
3643098 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.72 55.0 5.52e-01 83.6% 83.6%
3631167 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.71 59.0 5.23e-01 98.2% 98.8%
3344585 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.71 50.0 4.81e-01 76.4% 66.2%
3726805 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.71 56.0 5.37e-01 89.1% 78.1%
3814088 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 52.0 5.49e-01 83.6% 100.0%
3187719 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 60.0 5.46e-01 98.2% 98.7%
3437951 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.69 59.0 3.43e-01 96.4% 22.7%
3770072 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.69 60.0 5.14e-01 100.0% 84.4%
3441517 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.68 57.0 3.29e-01 94.5% 13.7%
3256545 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 55.0 5.25e-01 90.9% 76.9%
3802856 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.67 54.0 5.45e-01 89.1% 89.1%
3370474 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 59.0 5.61e-01 98.2% 92.3%
3420610 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.65 51.0 5.16e-01 87.3% 87.3%
3803973 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.63 51.0 4.78e-01 90.9% 72.9%
D2 medium residues 56-203
PDB
Domain cluster: rep: ankyrin_repeat_protein__YP_009119491__Pandoravirus_inopinatum__1605721__D219-359