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hypothetical_protein_pqer_cds_843
Euk-VirPandoravirus_quercus
hypothetical_protein_pqer_cds_843__YP_009483534__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009483534 ↗
- Protein ID:
- hypothetical_protein_pqer_cds_843
- Kingdom:
- euk
Quality
55.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 104-174_237-296
D2
medium
residues 297-379
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.75 | 50.0 | 5.78e-01 | 75.9% | 100.0% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.73 | 57.0 | 5.99e-01 | 83.1% | 96.0% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.71 | 56.0 | 5.63e-01 | 84.3% | 91.8% |
| 3qc1A01 | 1.25.40.540 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAP42-like family | 0.71 | 58.0 | 4.74e-01 | 88.0% | 60.9% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.71 | 56.0 | 4.91e-01 | 83.1% | 69.7% |
| 1vcsA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.70 | 54.0 | 5.01e-01 | 80.7% | 83.3% |
| 6a7hA01 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.70 | 57.0 | 4.93e-01 | 90.4% | 59.8% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 52.0 | 4.82e-01 | 83.1% | 94.4% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 55.0 | 4.54e-01 | 86.7% | 56.9% |
| 2l1lB00 | 1.20.1440.250 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.67 | 58.0 | 5.07e-01 | 97.6% | 94.5% |
| 1qgrA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.66 | 58.0 | 3.35e-01 | 100.0% | 23.1% |
| 8a0rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 56.0 | 4.87e-01 | 95.2% | 68.5% |
| 3c2gA02 | 1.10.10.1630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sys-1 C-terminal domain-like | 0.65 | 45.0 | 4.84e-01 | 84.3% | 88.2% |
| 4i2zA02 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.65 | 57.0 | 3.75e-01 | 100.0% | 34.5% |
| 3jz0A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.64 | 51.0 | 4.36e-01 | 84.3% | 70.0% |
| 4d0nB01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.64 | 54.0 | 3.94e-01 | 96.4% | 62.9% |
| 7zb5E01 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.63 | 56.0 | 3.78e-01 | 97.6% | 27.7% |
| 3qnfA04 | 1.10.3480.20 | Mainly Alpha › Orthogonal Bundle › TorD-like › | 0.62 | 54.0 | 4.25e-01 | 97.6% | 92.1% |
| 3u4qB04 | 6.10.140.1030 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 46.0 | 4.90e-01 | 92.8% | 97.1% |
| 2w3cA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.61 | 53.0 | 3.78e-01 | 98.8% | 48.3% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.61 | 44.0 | 4.62e-01 | 75.9% | 91.9% |
| 3nrhA00 | 1.20.120.1550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 | 0.61 | 48.0 | 3.94e-01 | 86.7% | 93.0% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 48.0 | 4.45e-01 | 90.4% | 84.1% |
| 1g3jC00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.60 | 51.0 | 3.31e-01 | 100.0% | 40.1% |
| 1dvpA01 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 49.0 | 4.25e-01 | 94.0% | 57.1% |
| 3k62A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 50.0 | 3.30e-01 | 98.8% | 41.0% |
| 2j9qB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 50.0 | 3.58e-01 | 97.6% | 98.1% |
| 4yvoA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 50.0 | 4.49e-01 | 98.8% | 82.4% |
| 2ii2A04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.58 | 48.0 | 4.89e-01 | 94.0% | 96.2% |
| 2kj9A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.58 | 40.0 | 3.57e-01 | 71.1% | 82.2% |
| 3lsjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 48.0 | 4.03e-01 | 96.4% | 73.9% |
| 1wolA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 48.0 | 4.21e-01 | 91.6% | 92.6% |
| 1o3uA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.54 | 45.0 | 3.93e-01 | 88.0% | 91.7% |
| 3qqaA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 42.0 | 3.67e-01 | 94.0% | 75.9% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.52 | 40.0 | 3.52e-01 | 84.3% | 85.3% |
| 3ejnA03 | 1.20.120.840 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SusD-like, tetratrico peptide repeats domain | 0.52 | 41.0 | 3.73e-01 | 84.3% | 73.9% |
| 2dlaA01 | 1.20.930.50 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.52 | 41.0 | 3.41e-01 | 89.2% | 60.6% |
| 3d8lA00 | 1.10.8.940 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein, phage p2 ORF12 | 0.50 | 43.0 | 4.15e-01 | 97.6% | 82.4% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3712503 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 64.0 | 4.28e-01 | 92.8% | 36.4% |
| 3411376 | 109.4.1.1654 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N, Symplekin_C | 0.73 | 64.0 | 3.56e-01 | 97.6% | 15.2% |
| 4002480 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 65.0 | 5.00e-01 | 98.8% | 73.3% |
| 4026377 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.69 | 63.0 | 3.80e-01 | 100.0% | 37.3% |
| 3781283 | 109.4.1.930 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_ECM29_C | 0.68 | 60.0 | 4.19e-01 | 98.8% | 69.3% |
| None | — | 0.68 | 60.0 | 4.13e-01 | 100.0% | 58.0% | |
| 3625019 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 59.0 | 4.54e-01 | 98.8% | 77.9% |
| 3766437 | 601.16.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › Insc_C | 0.67 | 53.0 | 4.75e-01 | 84.3% | 72.2% |
| 3171325 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 59.0 | 4.05e-01 | 98.8% | 68.3% |
| 3576253 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 57.0 | 4.51e-01 | 96.4% | 85.6% |
| 3734462 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.66 | 58.0 | 5.07e-01 | 97.6% | 99.2% |
| 3731082 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.66 | 48.0 | 5.01e-01 | 75.9% | 88.0% |
| 3641255 | 5059.1.1.3 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT | 0.66 | 49.0 | 3.93e-01 | 80.7% | 99.4% |
| 3660543 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 58.0 | 4.74e-01 | 100.0% | 70.3% |
| 3182673 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 56.0 | 4.22e-01 | 100.0% | 85.5% |
| 3481380 | 109.4.1.1301 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RAI16-like, KELAA, DUF5917 | 0.64 | 54.0 | 3.73e-01 | 95.2% | 40.3% |
| 4002239 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 55.0 | 3.45e-01 | 98.8% | 23.6% |
| 3878063 | 109.4.1.1310 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRIP12_N | 0.64 | 55.0 | 4.09e-01 | 97.6% | 51.4% |
| 4470602 | 109.4.1.427 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SDA1_HEAT | 0.62 | 54.0 | 4.19e-01 | 100.0% | 64.1% |
| 3353637 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 55.0 | 4.42e-01 | 100.0% | 71.4% |
| 4949366 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.62 | 50.0 | 3.35e-01 | 86.7% | 45.7% |
| 3497083 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 53.0 | 3.68e-01 | 100.0% | 40.3% |
| 4971358 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.57 | 47.0 | 4.09e-01 | 88.0% | 72.0% |
| 5079110 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.57 | 48.0 | 3.74e-01 | 95.2% | 83.7% |
| 4989195 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.57 | 39.0 | 3.50e-01 | 71.1% | 96.5% |
| 4029634 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 47.0 | 3.95e-01 | 94.0% | 84.7% |
| 5025553 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.54 | 42.0 | 3.93e-01 | 91.6% | 68.0% |
| 4941150 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.54 | 40.0 | 3.59e-01 | 80.7% | 80.0% |
| 3394470 | 193.1.1.0 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like | 0.51 | 40.0 | 3.74e-01 | 85.5% | 84.8% |
D3
medium
residues 414-474_507-526
D4
medium
residues 527-614
D5
medium
residues 615-728