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hypothetical_protein_pqer_cds_926

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_926__YP_009483617__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483617 ↗
Protein ID:
hypothetical_protein_pqer_cds_926
Kingdom:
euk

Quality

75.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 17-47
PDB
Domain cluster: rep: hypothetical_protein_psal_cds_1095__YP_008438391__Pandoravirus_salinus__1349410__D21-49
D2 medium residues 130-214
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kn1B00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.72 51.0 4.15e-01 74.1% 47.8%
1elkA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.71 61.0 5.05e-01 96.5% 62.7%
3lpzA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.71 59.0 4.04e-01 91.8% 26.5%
1fewA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 51.0 4.02e-01 76.5% 75.7%
1nfvA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.70 51.0 4.05e-01 76.5% 82.2%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 49.0 4.55e-01 74.1% 93.6%
1juqC00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 58.0 4.87e-01 98.8% 65.8%
5haxA01 1.20.58.1780 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 59.0 4.27e-01 100.0% 57.6%
2rkkA01 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.66 55.0 4.55e-01 91.8% 95.5%
3u4tB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 47.0 3.35e-01 88.2% 25.3%
2d9dA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.65 47.0 4.66e-01 76.5% 89.9%
3ay5A01 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.64 48.0 4.20e-01 81.2% 71.4%
4ga6A02 1.20.970.50 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › 0.64 53.0 4.46e-01 94.1% 57.2%
2oifB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 45.0 3.75e-01 74.1% 82.1%
6xssA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 46.0 5.03e-01 90.6% 94.2%
4yvoA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 51.0 4.56e-01 91.8% 63.9%
1mivA02 1.10.110.30 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › 0.62 51.0 4.92e-01 91.8% 89.6%
5cwkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 55.0 4.41e-01 100.0% 57.7%
1gu9C00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.61 46.0 3.73e-01 81.2% 65.5%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 45.0 4.21e-01 78.8% 99.0%
3gz1A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 44.0 3.70e-01 87.1% 45.1%
2lseA00 1.20.120.1360 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.60 42.0 3.99e-01 71.8% 62.4%
2fuqA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.60 52.0 3.53e-01 97.6% 28.2%
1sj8A02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.60 43.0 3.89e-01 77.6% 73.8%
5fzsA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 50.0 4.63e-01 96.5% 72.9%
3ro3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 52.0 4.21e-01 96.5% 59.1%
2b6cA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.58 48.0 4.67e-01 91.8% 82.5%
4ui9Y03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 43.0 4.48e-01 91.8% 85.0%
3vhlA02 1.20.58.740 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C 0.58 50.0 4.50e-01 97.6% 90.0%
7wu8B01 1.20.1160.20 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › 0.58 44.0 4.54e-01 81.2% 93.7%
2vkjA00 1.20.58.2030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 50.0 4.66e-01 96.5% 81.1%
3ma5A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 50.0 4.92e-01 95.3% 93.3%
2zcxA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 48.0 3.64e-01 92.9% 49.8%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.56 50.0 4.24e-01 97.6% 97.1%
2d05A02 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.56 36.0 3.41e-01 98.8% 50.5%
2c2lA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 50.0 4.32e-01 100.0% 66.9%
1hx8A02 1.20.58.150 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › ANTH domain 0.56 48.0 4.40e-01 98.8% 88.9%
5jj6B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 43.0 4.17e-01 90.6% 74.0%
3havB02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.55 47.0 3.61e-01 97.6% 95.2%
4mhlA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.54 46.0 3.66e-01 100.0% 47.8%
2wdqD00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.54 40.0 3.73e-01 78.8% 92.4%
2qzcA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.53 38.0 2.92e-01 75.3% 78.5%
6wv5A01 1.20.1440.130 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain 0.53 47.0 4.07e-01 100.0% 70.6%
2x6hA01 1.25.40.70 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) 0.52 46.0 3.62e-01 100.0% 58.6%
1fntc01 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.51 38.0 3.09e-01 83.5% 78.7%
1hi8A02 1.10.490.60 Mainly Alpha › Orthogonal Bundle › Globin-like › Phage p2 RNA dependent RNA polymerase domain 0.50 37.0 3.18e-01 77.6% 79.9%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3997150 109.4.1.15 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VHS 0.71 61.0 5.28e-01 96.5% 72.6%
3597139 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.71 58.0 4.76e-01 89.4% 85.8%
3934523 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.70 50.0 4.87e-01 75.3% 97.9%
3739552 109.42.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › E3 ubiquitin-protein ligase SHPRH first helical domain › E3 ubiquitin-protein ligase SHPRH first helical domain 0.69 49.0 3.89e-01 74.1% 57.1%
3927845 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.69 50.0 4.33e-01 76.5% 77.7%
3550587 109.4.1.15 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VHS 0.67 57.0 4.68e-01 97.6% 58.8%
5025906 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 49.0 4.66e-01 92.9% 67.0%
5012747 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.66 48.0 3.61e-01 75.3% 97.5%
3320951 601.2.1.5 ↗ alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr 0.63 47.0 4.25e-01 80.0% 80.8%
3601849 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 53.0 3.66e-01 96.5% 48.6%
4029791 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 54.0 3.34e-01 100.0% 51.1%
3915600 109.4.1.109 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 0.63 50.0 2.86e-01 88.2% 43.9%
3766135 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 42.0 3.50e-01 89.4% 40.0%
3194235 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 51.0 4.93e-01 95.3% 84.2%
3608070 109.24.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_A 0.60 53.0 4.07e-01 97.6% 81.1%
3558400 109.4.1.1706 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GoLoco, TPR_7, TPR_8, TPR_12 0.60 53.0 3.76e-01 97.6% 36.1%
3600217 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.59 47.0 3.34e-01 84.7% 37.2%
3262354 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 48.0 4.06e-01 92.9% 53.5%
1840703 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.58 42.0 4.10e-01 88.2% 70.2%
3576473 109.4.1.83 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf 0.57 50.0 3.10e-01 100.0% 17.3%
4169956 604.12.1.26 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › HemX 0.57 42.0 4.40e-01 81.2% 100.0%
3488467 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.55 40.0 3.59e-01 92.9% 55.7%
4448573 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.55 43.0 3.52e-01 84.7% 78.8%
4964311 5039.1.1.2 ↗ alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › DUF420 0.55 38.0 2.99e-01 70.6% 97.8%
3255779 109.4.1.1152 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_Nup120 0.55 47.0 3.68e-01 98.8% 95.5%
2132598 109.4.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.55 49.0 4.21e-01 100.0% 64.2%
3525328 109.4.1.484 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HPS3_C 0.55 46.0 3.72e-01 95.3% 62.3%
D3 medium residues 345-485
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp0353__YP_009119322__Pandoravirus_inopinatum__1605721__D347-476