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hypothetical_protein_pqer_cds_968

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_968__YP_009483659__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483659 ↗
Protein ID:
hypothetical_protein_pqer_cds_968
Kingdom:
euk

Quality

66.5 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 190-323
PDB
Domain cluster: rep: hypothetical_protein_pmac_cds_6__YP_009480690__Pandoravirus_macleodensis__2107707__D73-131_178-225
D2 medium residues 408-486
PDB
D3 medium residues 540-583
PDB
Domain cluster: rep: DNA_pol3_gamma3_superfamily_incomplete_domain__YP_008438449__Pandoravirus_salinus__1349410__D561-600
D4 medium residues 642-699_741-787
PDB
D5 medium residues 713-740_788-914
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3utmA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 53.0 5.69e-01 98.1% 87.0%
1juqC00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 47.0 4.78e-01 90.3% 84.6%
4hbdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.59 54.0 4.60e-01 100.0% 61.6%
3feyA02 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 50.0 4.67e-01 97.4% 73.4%
2wzkA02 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.54 42.0 4.54e-01 81.3% 100.0%
1w2qA01 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.53 37.0 4.18e-01 78.1% 96.5%
3nqpA00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 46.0 3.33e-01 100.0% 60.9%
3t6aA00 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.52 46.0 3.68e-01 96.8% 72.1%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.51 29.0 3.12e-01 89.0% 62.6%
1elrA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 33.0 3.55e-01 81.9% 76.6%
4hkaA01 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 42.0 3.43e-01 90.3% 94.2%
2j9wB00 1.20.120.1130 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain 0.50 29.0 3.49e-01 85.2% 86.9%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3276065 109.4.1.506 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nop14 0.58 52.0 4.02e-01 97.4% 45.2%
3189830 109.4.1.507 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3632 0.58 50.0 3.36e-01 96.1% 33.8%
3203207 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 50.0 4.06e-01 99.4% 61.0%
3488831 109.4.1.70 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.55 46.0 4.72e-01 94.2% 95.2%
3376834 109.4.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › W2 0.55 49.0 4.67e-01 97.4% 81.5%
3799909 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 49.0 4.33e-01 98.7% 92.2%
3560758 109.4.1.471 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GCFC 0.55 43.0 4.04e-01 83.2% 89.7%
4029855 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 48.0 4.39e-01 96.1% 71.0%
3820347 109.4.1.575 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF577 0.55 49.0 3.64e-01 99.4% 41.9%
4420971 109.25.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › GAIN 0.54 40.0 4.40e-01 85.8% 97.6%
3168296 109.4.1.81 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF-3c_N 0.53 47.0 3.63e-01 98.7% 65.6%
3465716 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 45.0 4.05e-01 97.4% 88.9%
5033233 3861.1.1.3 ↗ alpha bundles › Mitochondrial translocator protein (TSPO) › Mitochondrial translocator protein (TSPO) › Mitochondrial translocator protein (TSPO) › PF30661 0.51 44.0 3.72e-01 94.2% 63.0%
5004350 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 44.0 3.21e-01 100.0% 31.2%
3684028 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.51 46.0 3.30e-01 98.7% 34.3%
4997587 3651.1.1.1 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.51 38.0 4.08e-01 83.2% 91.1%