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hypothetical_protein_pqer_cds_972

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_972__YP_009483663__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483663 ↗
Protein ID:
hypothetical_protein_pqer_cds_972
Kingdom:
euk

Quality

74.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (18 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 27-56
PDB
Domain cluster: representative
D2 medium residues 102-209
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_815__YP_009482425__Pandoravirus_neocaledonia__2107708__D127-268
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2janA02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.57 37.0 3.85e-01 70.4% 71.3%
2ogwA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.56 41.0 3.78e-01 77.8% 96.6%
1rj1A00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.55 39.0 3.57e-01 73.1% 72.3%
1iygA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 41.0 3.83e-01 80.6% 66.2%
3i9v104 1.20.1440.230 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain 0.53 37.0 3.76e-01 75.0% 74.8%
3hqiA02 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.51 41.0 3.80e-01 100.0% 67.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4010684 3615.1.1.0 ↗ alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.60 42.0 2.88e-01 72.2% 97.5%
3493827 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.59 42.0 4.01e-01 74.1% 89.2%
3683572 109.4.1.1531 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF7812 0.54 44.0 3.11e-01 90.7% 50.6%
4083082 109.4.1.517 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med24_N 0.52 45.0 3.38e-01 94.4% 41.9%
3210050 109.4.1.1238 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zn_clus 0.51 43.0 2.83e-01 92.6% 31.6%
D3 medium residues 273-460
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zgdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.81 39.0 5.52e-01 70.7% 91.8%
6ghmC01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 50.0 5.92e-01 98.4% 97.0%
3uxgA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.69 57.0 6.07e-01 98.9% 98.2%
2dznA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.66 62.0 5.81e-01 99.5% 86.3%
6jd6B00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.64 57.0 5.66e-01 98.4% 91.1%
1iknD00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.64 60.0 5.74e-01 100.0% 92.6%
7xceA01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.64 59.0 5.36e-01 98.9% 78.7%
3eu9C00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.63 59.0 5.55e-01 100.0% 85.4%
1k1aA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.63 59.0 5.51e-01 100.0% 88.2%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.63 59.0 4.94e-01 100.0% 67.5%
4f5cA04 1.25.50.20 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › 0.61 52.0 4.34e-01 94.1% 52.4%
2ho1B00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 46.0 4.42e-01 92.0% 70.6%
6whbA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.58 51.0 4.51e-01 96.3% 91.7%
3as5A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 44.0 4.53e-01 98.9% 84.8%
7ep1B01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 50.0 4.65e-01 100.0% 90.1%
2w3cA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 49.0 4.46e-01 100.0% 85.3%
3tt9A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 49.0 4.57e-01 98.4% 95.3%
6hftA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 36.0 4.24e-01 77.7% 99.2%
3opbA01 1.25.10.100 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › 0.53 48.0 4.19e-01 99.5% 70.9%
2gw1A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 43.0 3.56e-01 93.1% 46.9%
4y6cA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 46.0 4.43e-01 96.3% 89.2%
4m7cB00 1.25.40.210 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain 0.52 40.0 3.98e-01 96.8% 76.8%
4jhrB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 45.0 3.93e-01 97.9% 67.5%
6u3wB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 42.0 3.70e-01 89.9% 67.0%
2vq2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 44.0 4.24e-01 96.3% 88.2%
7kdtA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 42.0 3.61e-01 95.7% 53.6%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3462930 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.73 53.0 6.10e-01 90.4% 100.0%
3517278 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.72 56.0 5.82e-01 97.9% 85.7%
4325700 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.72 59.0 6.39e-01 98.4% 100.0%
3806290 109.3.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.68 53.0 5.71e-01 79.8% 95.6%
3365622 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.68 55.0 4.19e-01 85.1% 47.5%
4149830 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.67 60.0 5.05e-01 99.5% 59.0%
3725739 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.67 62.0 5.82e-01 97.9% 82.7%
3627204 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.67 60.0 4.79e-01 99.5% 50.9%
3652826 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.67 50.0 4.47e-01 76.1% 73.7%
None — 0.67 62.0 4.84e-01 99.5% 73.0%
3528654 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.66 57.0 5.45e-01 97.9% 79.1%
3775358 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.66 62.0 5.07e-01 100.0% 60.6%
3423475 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.66 62.0 5.07e-01 100.0% 70.2%
4046751 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.66 61.0 5.42e-01 100.0% 77.4%
3691875 109.3.1.163 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.65 61.0 4.73e-01 100.0% 51.3%
3563286 109.3.1.163 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.65 61.0 5.39e-01 99.5% 74.6%
3531109 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.65 55.0 5.37e-01 88.8% 86.3%
3244140 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.65 60.0 3.97e-01 100.0% 34.8%
3746612 109.3.1.168 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_5 0.65 60.0 5.08e-01 99.5% 81.6%
3567267 109.3.1.165 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4, Ank_5 0.64 60.0 5.20e-01 98.9% 76.0%
3428686 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.64 59.0 5.04e-01 98.9% 73.2%
3765647 109.3.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.64 60.0 4.82e-01 100.0% 60.6%
3889520 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.64 60.0 5.07e-01 100.0% 67.1%
3919911 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.64 60.0 4.39e-01 100.0% 42.2%
3879133 109.3.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.63 59.0 5.13e-01 99.5% 74.9%
3750647 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.63 59.0 4.80e-01 100.0% 57.3%
3938364 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.62 58.0 4.39e-01 100.0% 56.8%
3905680 109.3.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.62 58.0 4.54e-01 100.0% 49.5%
4531426 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.62 58.0 5.36e-01 100.0% 82.6%
3406695 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.62 57.0 5.32e-01 98.9% 83.9%
3721578 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.62 51.0 5.03e-01 86.2% 94.4%
3506356 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.62 57.0 5.36e-01 100.0% 84.3%
3817096 109.3.1.39 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_3 0.61 56.0 4.35e-01 100.0% 72.5%
3708976 109.4.1.621 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 0.61 54.0 4.48e-01 96.8% 71.2%
3635524 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.61 57.0 3.95e-01 100.0% 44.1%
3936217 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 54.0 3.94e-01 100.0% 41.5%
3808015 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.60 51.0 4.82e-01 93.6% 77.7%
3446444 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.59 55.0 4.62e-01 97.9% 78.3%
3294940 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.59 55.0 4.01e-01 98.4% 49.2%
3897161 109.3.1.163 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.59 55.0 5.30e-01 99.5% 92.1%
4013143 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.59 54.0 4.35e-01 98.4% 60.6%
3820784 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.59 52.0 4.83e-01 100.0% 76.5%
3678682 109.4.1.1985 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, Eplus_motif, E_motif 0.59 49.0 4.36e-01 93.1% 60.7%
3464775 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.58 51.0 4.16e-01 100.0% 50.3%
3676531 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.58 49.0 4.77e-01 97.3% 81.0%
3458249 109.4.1.1269 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.58 50.0 4.57e-01 96.8% 71.4%
None — 0.57 53.0 4.15e-01 100.0% 54.6%
3713243 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 52.0 5.03e-01 100.0% 92.9%
3703921 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 51.0 3.78e-01 100.0% 51.0%
3933800 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 50.0 4.15e-01 94.7% 56.1%
3684054 109.4.1.1269 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.57 48.0 4.32e-01 96.8% 65.3%
3828334 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.57 47.0 4.08e-01 92.6% 56.7%
3469461 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.56 49.0 4.18e-01 95.7% 57.4%
3971763 109.4.1.202 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.56 41.0 3.97e-01 91.0% 65.6%
3438992 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.56 50.0 5.02e-01 100.0% 93.3%
3924806 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.56 49.0 4.72e-01 94.1% 89.8%
3654318 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.54 47.0 4.66e-01 95.7% 89.3%
3209046 109.4.1.559 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tuberin 0.53 44.0 3.77e-01 86.2% 99.7%
3902516 109.4.1.1448 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_7, TPR_10, TPR_12, TPR_MalT 0.52 44.0 4.01e-01 91.5% 71.5%
4956698 7011.1.1.0 ↗ alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain 0.51 36.0 3.31e-01 71.3% 72.5%
5051835 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 41.0 3.45e-01 94.1% 50.0%