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hypothetical_protein_pqer_cds_984

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_984__YP_009483675__Pandoravirus_quercus__2107709

Identity

Accession:: YP_009483675 ↗
Protein ID:: hypothetical_protein_pqer_cds_984
Kingdom:: euk

Quality

70.1 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 76-182_203-236

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5b2nA00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.61	42.0	3.46e-01	70.2%	94.3%
8b70A01	1.20.1740.10	Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I	0.55	44.0	3.19e-01	85.8%	69.1%
3qwlA03	1.10.472.80	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3	0.52	40.0	4.13e-01	96.5%	85.3%

D2 medium residues 241-353_370-449

PDB

Domain cluster: rep: hypothetical_protein_TW95_gp1591__YP_009120560__Pandoravirus_inopinatum__1605721__D181-198_210-259_277-315_339-420

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2h41A00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.59	21.0	2.93e-01	87.0%	61.1%
4h61A00	3.10.450.580	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mediator complex, subunit Med6	0.51	23.0	2.78e-01	73.1%	61.3%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3454372	4210.1.1.0 ↗	a+b two layers › WGR domain › WGR domain › WGR domain	0.62	29.0	3.99e-01	73.1%	85.0%
3445404	4210.1.1.0 ↗	a+b two layers › WGR domain › WGR domain › WGR domain	0.56	27.0	3.71e-01	72.0%	88.0%
3681710	4210.1.1.0 ↗	a+b two layers › WGR domain › WGR domain › WGR domain	0.56	28.0	3.92e-01	73.6%	96.8%
4429348	2484.1.1.311 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA, DDR, FtsA	0.56	40.0	3.12e-01	73.1%	94.7%
3299711	3459.1.1.3 ↗	beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868	0.55	33.0	3.86e-01	89.6%	82.2%
3976937	2484.1.1.178 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA+FtsA	0.55	39.0	3.11e-01	73.1%	97.0%
3801224	9.1.1.0 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins	0.55	26.0	3.20e-01	70.5%	69.4%
3592741	330.1.1.0 ↗	a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like	0.52	23.0	3.39e-01	86.5%	91.8%
3927497	2484.5.1.3 ↗	mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2	0.51	22.0	3.32e-01	72.5%	95.0%
3849839	4210.1.1.0 ↗	a+b two layers › WGR domain › WGR domain › WGR domain	0.51	27.0	3.69e-01	74.1%	99.0%
4975626	213.1.1.1 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1	0.50	31.0	3.56e-01	91.2%	82.5%

D3 medium residues 450-572

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3zheB02	1.20.190.60	Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 ›	0.54	39.0	3.48e-01	76.4%	79.0%
2p7vA00	1.20.120.1370	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulator of RNA polymerase sigma(70) subunit, domain 4	0.52	36.0	3.42e-01	72.4%	86.8%
1gwiA00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.51	42.0	2.98e-01	91.1%	70.9%
3pjaJ01	1.20.58.190	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1	0.50	36.0	3.61e-01	87.8%	71.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4947260	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.54	33.0	3.95e-01	75.6%	92.5%
3603733	4121.1.1.19 ↗	a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › PF27230	0.52	39.0	2.96e-01	79.7%	91.3%