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hypothetical_protein_pqer_cds_995

Euk-Vir

Pandoravirus_quercus

hypothetical_protein_pqer_cds_995__YP_009483686__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483686 ↗
Protein ID:
hypothetical_protein_pqer_cds_995
Kingdom:
euk

Quality

71.3 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-104
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_819__YP_009482429__Pandoravirus_neocaledonia__2107708__D18-93
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r9iA00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.85 54.0 5.63e-01 96.1% 70.4%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.81 53.0 4.35e-01 93.5% 39.1%
1o57A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 51.0 5.32e-01 75.3% 73.6%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 47.0 5.64e-01 72.7% 96.0%
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.75 37.0 4.18e-01 93.5% 62.1%
5lbmA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.74 49.0 4.84e-01 93.5% 63.9%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 48.0 5.08e-01 83.1% 83.8%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.85e-01 74.0% 85.9%
1gnlA01 1.20.1270.20 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.68 44.0 3.58e-01 77.9% 36.7%
1w33A00 1.10.3160.10 Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 0.68 53.0 3.96e-01 83.1% 46.4%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.66 53.0 5.11e-01 89.6% 74.7%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.66 52.0 4.86e-01 90.9% 68.1%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 4.52e-01 74.0% 83.3%
2mw8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 45.0 4.80e-01 79.2% 88.1%
1q6aA00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.62 48.0 4.27e-01 81.8% 61.7%
7qx4A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.61 55.0 3.86e-01 98.7% 39.3%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 42.0 4.39e-01 83.1% 80.3%
1w53A00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.59 44.0 4.36e-01 80.5% 75.0%
3ktdD02 1.10.3660.10 Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain 0.59 47.0 4.22e-01 87.0% 76.1%
4jd9G00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.58 40.0 3.47e-01 71.4% 50.0%
4q5rA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 38.0 3.34e-01 76.6% 45.5%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 3.85e-01 88.3% 71.3%
7p3rA01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.57 51.0 3.37e-01 100.0% 90.5%
2odmA00 1.10.287.750 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like 0.53 37.0 3.67e-01 71.4% 79.7%
4e21B02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.53 44.0 3.75e-01 97.4% 86.9%
2v5cA03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.51 43.0 3.61e-01 92.2% 66.2%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4966803 101.1.2.948 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27297 0.79 58.0 5.49e-01 76.6% 76.7%
3200990 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.79 45.0 3.52e-01 80.5% 29.3%
3815026 604.1.1.148 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TBCC_N 0.72 43.0 4.21e-01 85.7% 54.1%
3393794 3922.1.1.211 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DRC7_C 0.72 49.0 4.06e-01 96.1% 40.7%
3983938 608.1.1.0 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like 0.71 59.0 4.50e-01 89.6% 61.2%
4930318 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 55.0 4.59e-01 84.4% 83.8%
4956241 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.69 36.0 3.64e-01 83.1% 50.7%
4061849 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.68 51.0 4.52e-01 94.8% 55.5%
3738569 604.7.1.1 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.68 47.0 4.24e-01 96.1% 52.4%
3548194 192.2.1.18 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING 0.67 52.0 4.55e-01 90.9% 56.4%
3636338 192.2.1.18 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING 0.67 55.0 4.57e-01 90.9% 52.8%
5038928 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.67 53.0 4.45e-01 85.7% 84.6%
4022294 1025.1.1.0 ↗ alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain 0.65 44.0 3.98e-01 93.5% 51.4%
4977678 192.1.1.50 ↗ alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › EMC3_TMCO1 0.64 50.0 3.91e-01 96.1% 40.6%
3496884 109.4.1.840 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CFA69_ARM_rpt 0.61 53.0 3.17e-01 94.8% 21.4%
4224489 4156.1.1.4 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C 0.61 51.0 3.17e-01 92.2% 56.7%
3798329 3919.1.1.0 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.61 46.0 4.15e-01 83.1% 59.1%
3460130 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.56 40.0 3.98e-01 75.3% 92.5%
4247702 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 41.0 2.88e-01 84.4% 31.5%
3594304 3877.1.1.0 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.54 43.0 3.06e-01 88.3% 31.4%
4018889 2004.1.1.481 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 0.54 46.0 2.89e-01 96.1% 19.1%