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hypothetical_protein_psal_cds_1015

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_1015__YP_009430109__Pandoravirus_salinus__1349410

Identity

Accession:
YP_009430109 ↗
Protein ID:
hypothetical_protein_psal_cds_1015
Kingdom:
euk

Quality

74.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 44-181
PDB
Domain cluster: rep: hypothetical_protein_pdul_cds_100__YP_008318674__Pandoravirus_dulcis__1349409__D193-319
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d2uE01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.64 45.0 4.01e-01 100.0% 51.6%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 26.0 3.18e-01 74.6% 57.0%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 29.0 3.89e-01 98.6% 89.7%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 30.0 3.84e-01 97.8% 83.1%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 27.0 3.96e-01 98.6% 96.7%
3pggA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 29.0 3.81e-01 97.8% 82.1%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 28.0 3.67e-01 97.8% 81.3%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 29.0 3.72e-01 98.6% 82.7%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 29.0 3.67e-01 99.3% 82.3%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 26.0 3.46e-01 100.0% 78.4%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.55 40.0 3.69e-01 94.2% 58.2%
1bp1A01 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.54 38.0 3.47e-01 71.7% 70.6%
6dxwA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.51 41.0 3.57e-01 89.1% 94.8%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3689743 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.57 39.0 3.62e-01 71.0% 92.8%
3215987 225.1.1.7 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.56 38.0 3.09e-01 100.0% 35.4%
5014177 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.54 39.0 3.69e-01 94.9% 61.3%
3610074 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.53 30.0 3.36e-01 100.0% 69.1%
3671146 280.1.1.1 ↗ a+b two layers › Ribonuclease Rh-like › Ribonuclease Rh-like › Ribonuclease Rh-like › Ribonuclease_T2 0.51 46.0 4.06e-01 100.0% 83.9%
4031410 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.51 39.0 3.57e-01 93.5% 61.1%
3959837 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 24.0 2.92e-01 100.0% 65.9%
D2 high residues 186-287
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp1558__YP_009120527__Pandoravirus_inopinatum__1605721__D202-300
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sqmA04 1.25.40.320 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal domain 0.63 44.0 3.91e-01 72.5% 70.5%
3o4zA02 1.25.40.720 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tel2 C-terminal domain 0.61 44.0 3.62e-01 76.5% 65.5%
2dbgA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.55 32.0 3.23e-01 92.2% 55.3%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.53 39.0 3.84e-01 78.4% 92.1%
4w66B00 1.20.1050.130 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 41.0 3.24e-01 85.3% 81.4%
1dvkA00 1.20.940.10 Mainly Alpha › Up-down Bundle › RNA Binding Protein, Prp18; Chain A › Functional domain of the splicing factor Prp18 0.51 37.0 3.30e-01 98.0% 52.3%
3on2A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 36.0 2.94e-01 92.2% 40.0%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3546846 189.1.1.2 ↗ alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP 0.60 44.0 3.54e-01 77.5% 59.5%
4584259 532.2.1.1 ↗ alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › HrpJ 0.57 48.0 4.80e-01 96.1% 92.4%
3734885 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.56 40.0 2.85e-01 74.5% 64.6%
3890544 7015.1.1.1 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC 0.54 38.0 3.02e-01 71.6% 47.2%
3511712 5069.1.3.66 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › 7TM_GPCR_Srw 0.53 39.0 3.56e-01 76.5% 80.0%
3286347 5057.1.1.0 ↗ alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.53 46.0 3.98e-01 99.0% 93.3%
3857583 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 39.0 2.64e-01 77.5% 33.2%
3577761 3890.1.1.1 ↗ alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Bax1-I 0.51 42.0 3.78e-01 88.2% 68.6%
3926221 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.51 41.0 3.01e-01 89.2% 82.6%
3565766 603.1.1.103 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 0.51 38.0 3.27e-01 78.4% 93.1%
3772076 601.1.2.47 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › MARVEL 0.51 37.0 3.49e-01 93.1% 63.2%