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hypothetical_protein_psal_cds_1030
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_1030__YP_008438292__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438292 ↗
- Protein ID:
- hypothetical_protein_psal_cds_1030
- Kingdom:
- euk
Quality
64.4
mean pLDDT
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-90
Domain cluster:
rep: hypothetical_protein_pqer_cds_746__YP_009483437__Pandoravirus_quercus__2107709__D17-84
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4l7mA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.52 | 45.0 | 3.17e-01 | 98.7% | 36.4% |
| 1b7eA02 | 1.10.740.10 | Mainly Alpha › Orthogonal Bundle › Transferase Inhibitor Protein From Tn5; Chain A, domain2 › Transferase Inhibitor Protein From Tn5; Chain | 0.50 | 36.0 | 3.17e-01 | 78.9% | 54.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3929036 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.61 | 51.0 | 4.63e-01 | 97.4% | 92.7% |
| 3452886 | 145.1.1.60 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › Beta-prop_KIB1-4 | 0.57 | 52.0 | 4.12e-01 | 100.0% | 80.0% |
| 5079767 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 42.0 | 2.76e-01 | 81.6% | 29.7% |
D2
high
residues 91-253
Domain cluster:
rep: hypothetical_protein_psal_cds_153__YP_008436689__Pandoravirus_salinus__1349410__D114-300
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4txiA03 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.60 | 27.0 | 3.38e-01 | 92.0% | 66.0% |
| 1wjoA01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.53 | 27.0 | 3.30e-01 | 89.6% | 74.0% |