hypothetical_protein_psal_cds_1040

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_1040__YP_008438307__Pandoravirus_salinus__1349410

Identity

51.2 mean pLDDT

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 221-277

PDB

D2 medium residues 405-466

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19253.5 best	DUF5900	73.2	2.60e-20	82.3%	49.5%

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2zttA00	6.10.140.720	Special › Helix non-globular › Helix Hairpins ›	0.68	49.0	4.66e-01	75.8%	86.3%
6t0bc01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.66	46.0	4.33e-01	74.2%	59.0%
4od8D00	6.10.140.1880	Special › Helix non-globular › Helix Hairpins ›	0.66	45.0	4.85e-01	71.0%	86.3%
2mpnA00	6.10.140.1340	Special › Helix non-globular › Helix Hairpins ›	0.65	44.0	4.35e-01	71.0%	89.7%
2wmmA01	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.65	45.0	4.96e-01	74.2%	95.9%
1l7vA00	1.10.3470.10	Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC	0.63	43.0	2.77e-01	74.2%	14.9%
2jaeA03	1.20.1440.240	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.62	43.0	3.77e-01	74.2%	71.3%
2qkdA02	2.60.120.1040	Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain	0.61	46.0	3.55e-01	80.6%	41.4%
2nn4A00	1.10.287.760	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like	0.58	48.0	4.88e-01	93.5%	100.0%
2jx4A01	6.10.140.460	Special › Helix non-globular › Helix Hairpins ›	0.57	40.0	4.40e-01	77.4%	97.9%
1y71A00	2.30.30.430	Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain	0.50	36.0	3.11e-01	79.0%	88.1%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3505507	1134.1.1.0 ↗	alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain	0.68	53.0	5.09e-01	83.9%	95.7%
3475796	5081.1.1.4 ↗	alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751	0.67	59.0	4.17e-01	100.0%	93.8%
3234516	104.1.1.1 ↗	alpha duplicates or obligate multimers › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain › TFIIA_gamma_N	0.66	37.0	4.05e-01	100.0%	68.0%
1515939	244.1.1.6 ↗	a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase	0.63	43.0	2.81e-01	74.2%	22.4%
4270602	2003.1.2.18 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain	0.62	43.0	2.68e-01	74.2%	17.5%
4110039	151.1.1.1 ↗	alpha bundles › Hemocyanin-N › Hemocyanin-N › Hemocyanin-N › Hemocyanin_N	0.61	48.0	3.63e-01	87.1%	41.3%
3189353	548.1.1.1 ↗	alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain › GRIP	0.59	36.0	3.97e-01	71.0%	78.0%
4033902	4146.1.1.1 ↗	alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › YqgQ-like	0.58	48.0	4.92e-01	91.9%	100.0%
3643401	109.1.1.26 ↗	alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_N_3	0.52	41.0	3.01e-01	96.8%	78.6%