←Back to structures

hypothetical_protein_psal_cds_1054

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_1054__YP_008438331__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438331 ↗
Protein ID:
hypothetical_protein_psal_cds_1054
Kingdom:
euk

Quality

71.0 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 79-260
PDB
Domain cluster: rep: hypothetical_protein_psal_cds_970__YP_008438203__Pandoravirus_salinus__1349410__D77-133_147-246
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qk2A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.61 52.0 4.75e-01 98.4% 70.1%
2i2oA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 53.0 5.05e-01 95.1% 90.0%
4cruB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.59 54.0 4.72e-01 100.0% 71.5%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 51.0 5.03e-01 97.3% 88.1%
3ebbA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 52.0 4.59e-01 100.0% 78.8%
4dvgB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 51.0 4.32e-01 97.3% 63.9%
3r2qA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.56 34.0 4.16e-01 94.0% 94.7%
6i57A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 38.0 4.37e-01 87.9% 99.2%
7dvqK01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 46.0 4.69e-01 87.4% 91.9%
3ro3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 40.0 4.25e-01 84.6% 85.5%
3wi3B00 1.20.58.2130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 45.0 4.30e-01 87.4% 100.0%
7ldgA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 48.0 4.54e-01 97.3% 90.5%
6u3wB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 47.0 4.06e-01 95.6% 64.6%
4wnfA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 48.0 4.28e-01 97.3% 84.7%
3k8pC02 1.10.357.150 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › 0.53 42.0 4.16e-01 82.4% 84.7%
4m7cB00 1.25.40.210 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain 0.53 40.0 3.96e-01 83.5% 73.2%
2aw6A02 1.25.40.400 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 47.0 4.44e-01 100.0% 93.2%
3k66A01 1.20.120.770 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain 0.50 41.0 3.96e-01 86.3% 96.7%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3701336 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 44.0 4.75e-01 86.3% 85.3%
3787931 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 54.0 4.95e-01 96.7% 88.7%
3654683 109.4.1.1384 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_long 0.61 46.0 4.86e-01 96.7% 88.1%
3459222 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.61 50.0 4.71e-01 98.4% 71.6%
3223186 109.4.1.929 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ECM29 0.61 51.0 4.65e-01 88.5% 75.7%
3615514 109.4.1.621 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 0.60 48.0 4.81e-01 98.9% 81.4%
3682372 109.4.1.1361 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_CAND1 0.60 49.0 5.01e-01 86.8% 100.0%
4014970 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 53.0 3.71e-01 97.8% 73.7%
3658729 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.58 44.0 4.53e-01 96.2% 82.8%
3174125 109.4.1.22 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N 0.58 49.0 4.13e-01 97.3% 53.5%
3651295 109.4.1.1374 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, TPR_24 0.58 48.0 4.89e-01 98.4% 91.4%
3309352 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.57 43.0 4.51e-01 98.4% 86.5%
3593023 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 46.0 3.86e-01 87.4% 88.9%
3708535 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 50.0 4.66e-01 97.8% 78.2%
3836238 109.4.1.64 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GET4 0.56 48.0 4.03e-01 91.8% 72.3%
4052932 109.4.1.1232 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_SRB8 0.53 45.0 4.49e-01 90.7% 93.7%
3810538 109.4.1.643 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG2_C 0.53 44.0 3.04e-01 89.0% 35.6%
3540625 109.4.1.403 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Foie-gras_1 0.52 43.0 4.28e-01 88.5% 96.2%
3932465 109.4.1.64 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GET4 0.51 45.0 3.69e-01 97.3% 82.6%