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hypothetical_protein_psal_cds_1077
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_1077__YP_008438365__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438365 ↗
- Protein ID:
- hypothetical_protein_psal_cds_1077
- Kingdom:
- euk
Quality
63.2
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 108-226
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19255.5 best | DUF5902 | 43.3 | 5.20e-11 | 91.6% | 80.8% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p79A00 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.62 | 41.0 | 3.60e-01 | 78.2% | 44.8% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 40.0 | 3.99e-01 | 73.9% | 100.0% |
| 4gyvE00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.53 | 44.0 | 3.62e-01 | 89.9% | 69.8% |
| 3pm0A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.50 | 44.0 | 2.98e-01 | 95.8% | 66.0% |
| 5ljmA00 | 1.20.58.2190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 42.0 | 3.47e-01 | 88.2% | 91.6% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3239226 | 604.6.1.2 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › ANTH | 0.63 | 38.0 | 3.69e-01 | 78.2% | 53.8% |
| 3264751 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.60 | 38.0 | 3.54e-01 | 79.8% | 51.0% |
| 3616077 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.58 | 41.0 | 3.54e-01 | 73.1% | 61.6% |
| 3796795 | 108.1.1.26 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 | 0.56 | 44.0 | 4.05e-01 | 94.1% | 64.7% |
| 3466126 | 109.4.1.25 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DIL | 0.56 | 46.0 | 3.45e-01 | 90.8% | 58.3% |
| 3176663 | 603.1.1.207 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF30350 | 0.56 | 47.0 | 4.55e-01 | 89.1% | 82.3% |
| 3273331 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.55 | 46.0 | 3.24e-01 | 89.9% | 81.6% |
| 3828953 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 45.0 | 2.89e-01 | 89.9% | 37.7% |
| 3934745 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 42.0 | 3.99e-01 | 95.8% | 67.6% |
| 4260684 | 605.1.1.147 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › TMEM151 | 0.54 | 45.0 | 4.45e-01 | 89.1% | 84.0% |
| 3795102 | 108.1.1.21 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › SPARC_Ca_bdg | 0.53 | 43.0 | 3.56e-01 | 86.6% | 65.7% |
| 4525886 | 109.4.1.1360 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CBF, NOC3p | 0.53 | 45.0 | 2.97e-01 | 100.0% | 62.3% |
| 3389823 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 41.0 | 3.98e-01 | 84.9% | 93.2% |
| 3615940 | 4163.1.2.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 | 0.51 | 42.0 | 4.19e-01 | 86.6% | 85.0% |
| 3483983 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 44.0 | 3.29e-01 | 93.3% | 94.0% |
| 4018881 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.50 | 44.0 | 2.89e-01 | 95.8% | 58.3% |
| 3853953 | 601.1.2.53 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DGKD_4H | 0.50 | 38.0 | 3.75e-01 | 82.4% | 74.4% |
| 3787270 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.50 | 43.0 | 3.51e-01 | 95.0% | 72.2% |
D2
medium
residues 227-341