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hypothetical_protein_psal_cds_1078

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_1078__YP_008438366__Pandoravirus_salinus__1349410

Identity

Accession:: YP_008438366 ↗
Protein ID:: hypothetical_protein_psal_cds_1078
Kingdom:: euk

Quality

73.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 494-625

PDB

D2 medium residues 48-118

PDB

Domain cluster: rep: hypothetical_protein_pneo_cds_1075__YP_009482685__Pandoravirus_neocaledonia__2107708__D46-104

D3 medium residues 147-266

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4q5nA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.65	47.0	4.82e-01	74.2%	99.1%
1wy6A00	1.25.40.350	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.57	51.0	4.65e-01	99.2%	84.3%
2l6jA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.57	43.0	4.52e-01	79.2%	85.6%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3264266	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.70	59.0	5.34e-01	90.0%	67.5%
3267923	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.70	61.0	4.22e-01	95.8%	29.9%
3256457	109.58.1.4 ↗	alpha superhelices › Repetitive alpha hairpins › DNA repair protein Rev1 C-terminal domain › DNA repair protein Rev1 C-terminal domain › PF28996	0.69	63.0	5.40e-01	98.3%	68.6%
3265995	109.3.1.189 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF28996	0.69	61.0	5.44e-01	97.5%	76.5%
3432914	109.4.1.420 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR	0.66	59.0	4.57e-01	99.2%	52.9%
3808793	109.4.1.1334 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, PPR_long	0.65	53.0	4.98e-01	93.3%	72.4%
3356967	109.4.1.883 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2	0.64	58.0	5.32e-01	100.0%	88.4%
5053126	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.60	45.0	4.07e-01	78.3%	62.4%
3169517	109.46.1.1 ↗	alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH	0.54	40.0	3.80e-01	80.8%	63.3%
3504178	109.4.1.192 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8	0.54	46.0	4.54e-01	98.3%	90.0%
3596158	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	40.0	3.80e-01	80.0%	100.0%
3170239	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.52	35.0	3.96e-01	80.0%	93.3%