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hypothetical_protein_psal_cds_1098
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_1098__YP_008438395__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438395 ↗
- Protein ID:
- hypothetical_protein_psal_cds_1098
- Kingdom:
- euk
Quality
71.0
mean pLDDT
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 41-97
D2
medium
residues 98-234
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hraA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.64 | 57.0 | 5.07e-01 | 97.8% | 86.9% |
| 5dikA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.62 | 39.0 | 4.27e-01 | 89.8% | 76.8% |
| 4leuA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 54.0 | 4.95e-01 | 99.3% | 91.8% |
| 2b6cA02 | 1.25.40.290 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains | 0.58 | 39.0 | 4.48e-01 | 91.2% | 96.9% |
| 6t0bf00 | 1.25.40.40 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI | 0.57 | 40.0 | 4.50e-01 | 78.1% | 97.1% |
| 2b3fC02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 42.0 | 3.75e-01 | 77.4% | 84.5% |
| 4g26A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 48.0 | 3.78e-01 | 93.4% | 57.7% |
| 4me2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 49.0 | 4.43e-01 | 100.0% | 74.2% |
| 1b0bA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 37.0 | 3.68e-01 | 74.5% | 66.0% |
| 2hr2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 44.0 | 4.25e-01 | 86.9% | 91.7% |
| 5bz1A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 48.0 | 3.56e-01 | 98.5% | 40.7% |
| 7kdtA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 44.0 | 3.42e-01 | 89.1% | 51.7% |
| 5m72A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 43.0 | 4.26e-01 | 96.4% | 80.7% |
| 4b0zA00 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 46.0 | 3.93e-01 | 97.1% | 74.4% |
| 3nivC02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 40.0 | 4.20e-01 | 80.3% | 97.6% |
| 2fbnA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 44.0 | 4.30e-01 | 93.4% | 90.2% |
| 4ga0A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 43.0 | 4.26e-01 | 100.0% | 89.5% |
| 1qf9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 38.0 | 3.45e-01 | 78.8% | 73.7% |
| 8bfiB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 42.0 | 3.29e-01 | 89.8% | 52.6% |
| 7vepA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 41.0 | 3.41e-01 | 89.1% | 48.6% |
| 3ztaA00 | 1.10.490.130 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.50 | 35.0 | 3.52e-01 | 70.8% | 87.1% |
| 2kckA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 37.0 | 3.98e-01 | 83.9% | 94.6% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.50 | 44.0 | 3.91e-01 | 100.0% | 67.1% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3198152 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.62 | 56.0 | 3.56e-01 | 100.0% | 19.6% |
| 3317864 | 109.4.1.1293 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 | 0.61 | 43.0 | 4.76e-01 | 80.3% | 93.3% |
| 3373036 | 109.4.1.1275 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 | 0.61 | 54.0 | 3.54e-01 | 100.0% | 24.4% |
| 3654929 | 109.4.1.1440 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, TPR_24 | 0.61 | 53.0 | 3.72e-01 | 97.8% | 37.9% |
| 3678347 | 109.4.1.1440 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, TPR_24 | 0.60 | 54.0 | 3.23e-01 | 100.0% | 16.5% |
| 3651412 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.60 | 51.0 | 4.70e-01 | 91.2% | 76.3% |
| 3818643 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 47.0 | 4.91e-01 | 93.4% | 91.2% |
| 3810049 | 109.4.1.1261 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long | 0.59 | 51.0 | 4.77e-01 | 100.0% | 75.9% |
| 3312486 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.59 | 46.0 | 4.26e-01 | 93.4% | 64.0% |
| 3655236 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.59 | 40.0 | 4.66e-01 | 78.8% | 100.0% |
| 3324676 | 109.4.1.1336 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3 | 0.59 | 45.0 | 4.63e-01 | 92.0% | 83.5% |
| 3676669 | 109.4.1.775 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 42.0 | 4.47e-01 | 89.1% | 84.2% |
| 3359280 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.58 | 52.0 | 4.68e-01 | 98.5% | 73.7% |
| 3802454 | 109.4.1.775 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 49.0 | 4.91e-01 | 100.0% | 88.6% |
| 3663471 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.58 | 51.0 | 3.95e-01 | 94.9% | 69.7% |
| 3367929 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.58 | 50.0 | 4.05e-01 | 98.5% | 48.7% |
| 3817912 | 109.4.1.1330 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, PPR_long | 0.58 | 52.0 | 4.34e-01 | 100.0% | 67.8% |
| 3316492 | 109.4.1.1382 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, TPR_24 | 0.57 | 52.0 | 3.94e-01 | 100.0% | 53.8% |
| 3423594 | 109.4.1.1277 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 | 0.57 | 50.0 | 4.13e-01 | 96.4% | 71.6% |
| 3354832 | 109.4.1.1305 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long, TPR_24 | 0.57 | 51.0 | 3.97e-01 | 100.0% | 52.1% |
| 3436896 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.57 | 51.0 | 3.93e-01 | 100.0% | 60.0% |
| 3661146 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.57 | 50.0 | 4.74e-01 | 98.5% | 84.2% |
| 3429771 | 109.4.1.1275 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 | 0.56 | 50.0 | 3.28e-01 | 99.3% | 25.5% |
| 3837586 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.56 | 50.0 | 3.62e-01 | 99.3% | 33.7% |
| 3802150 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.56 | 50.0 | 4.25e-01 | 100.0% | 78.3% |
| 3381954 | 109.4.1.1610 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, E_motif | 0.56 | 50.0 | 3.27e-01 | 100.0% | 22.0% |
| 3316195 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.56 | 49.0 | 4.68e-01 | 98.5% | 81.8% |
| 3337092 | 109.4.1.1382 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, TPR_24 | 0.56 | 50.0 | 3.79e-01 | 100.0% | 47.0% |
| 3823029 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.56 | 50.0 | 3.23e-01 | 100.0% | 27.4% |
| 3431787 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.56 | 50.0 | 4.61e-01 | 100.0% | 77.1% |
| 3300162 | 109.4.1.1274 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long | 0.56 | 49.0 | 3.74e-01 | 100.0% | 47.3% |
| 3298908 | 109.4.1.1295 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, TPR_24 | 0.56 | 50.0 | 3.65e-01 | 100.0% | 41.5% |
| 3351963 | 109.4.1.1282 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 | 0.56 | 50.0 | 3.50e-01 | 100.0% | 42.4% |
| 3355500 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.56 | 50.0 | 3.44e-01 | 100.0% | 38.8% |
| 3464783 | 109.4.1.1335 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif | 0.55 | 49.0 | 3.69e-01 | 100.0% | 38.8% |
| 3330588 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.55 | 44.0 | 4.51e-01 | 100.0% | 88.1% |
| 3338873 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.55 | 49.0 | 3.88e-01 | 100.0% | 54.0% |
| 3669291 | 109.4.1.1282 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 | 0.55 | 49.0 | 4.08e-01 | 100.0% | 67.2% |
| 3667727 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.55 | 49.0 | 4.07e-01 | 100.0% | 60.8% |
| 3870409 | 109.4.1.2292 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, HAT_PRP39_N, HAT_PRP39_C | 0.55 | 48.0 | 3.88e-01 | 100.0% | 49.0% |
| 3654318 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.55 | 50.0 | 4.36e-01 | 100.0% | 81.0% |
| None | — | 0.55 | 48.0 | 3.94e-01 | 100.0% | 51.6% | |
| 3457719 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.55 | 49.0 | 3.31e-01 | 100.0% | 25.1% |
| 3318513 | 109.4.1.1260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long | 0.55 | 49.0 | 4.04e-01 | 100.0% | 63.5% |
| 3651804 | 109.4.1.1520 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, E_motif | 0.55 | 49.0 | 3.37e-01 | 100.0% | 32.0% |
| 3815037 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.55 | 49.0 | 3.19e-01 | 100.0% | 24.8% |
| 4218735 | 109.4.1.2787 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf, TPR_6, HAT_Syf1_CNRKL1_N | 0.55 | 48.0 | 3.85e-01 | 100.0% | 48.1% |
| 3680994 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.55 | 49.0 | 3.68e-01 | 100.0% | 46.2% |
| 3599805 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.55 | 47.0 | 4.47e-01 | 93.4% | 81.9% |
| 3446153 | 109.4.1.1292 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3 | 0.55 | 48.0 | 4.03e-01 | 100.0% | 55.8% |
| 3337015 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.55 | 49.0 | 4.10e-01 | 100.0% | 65.8% |
| 3817305 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.55 | 49.0 | 4.30e-01 | 100.0% | 77.6% |
| 3832904 | 109.4.1.1293 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 | 0.54 | 48.0 | 3.65e-01 | 100.0% | 48.2% |
| 3453112 | 109.4.1.1382 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, TPR_24 | 0.54 | 49.0 | 4.37e-01 | 100.0% | 81.0% |
| 3466001 | 109.4.1.1274 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long | 0.54 | 49.0 | 3.99e-01 | 100.0% | 63.3% |
| 3641285 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.54 | 49.0 | 3.24e-01 | 99.3% | 24.7% |
| 3681440 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.54 | 49.0 | 3.29e-01 | 100.0% | 30.3% |
| 3833574 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.54 | 48.0 | 4.62e-01 | 97.1% | 91.0% |
| 3458100 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.54 | 47.0 | 3.69e-01 | 99.3% | 54.8% |
| 3453496 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.54 | 48.0 | 3.46e-01 | 100.0% | 37.8% |
| 3828878 | 109.4.1.1260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long | 0.54 | 48.0 | 4.48e-01 | 99.3% | 82.3% |
| 3808392 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.54 | 47.0 | 4.02e-01 | 99.3% | 57.0% |
| 3805721 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.54 | 48.0 | 4.30e-01 | 100.0% | 80.0% |
| 3806180 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.54 | 48.0 | 3.10e-01 | 100.0% | 26.7% |
| 3675657 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.54 | 48.0 | 3.34e-01 | 100.0% | 34.6% |
| 3999694 | 109.26.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › TPR_Nup160_C, TPR_NUP160_120_M | 0.54 | 47.0 | 3.68e-01 | 98.5% | 49.5% |
| 3464716 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.54 | 47.0 | 4.31e-01 | 99.3% | 72.6% |
| 3308567 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.54 | 46.0 | 4.37e-01 | 96.4% | 81.8% |
| 3454452 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.53 | 48.0 | 4.47e-01 | 100.0% | 89.4% |
| 3764056 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 44.0 | 3.94e-01 | 90.5% | 62.6% |
| 3458692 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.53 | 47.0 | 4.42e-01 | 100.0% | 90.9% |
| 3809339 | 109.4.1.1282 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 | 0.53 | 47.0 | 4.05e-01 | 100.0% | 72.6% |
| 3345657 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.53 | 46.0 | 3.97e-01 | 99.3% | 66.8% |
| 3327905 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.53 | 47.0 | 4.46e-01 | 100.0% | 92.1% |
| 3420652 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.53 | 45.0 | 4.14e-01 | 100.0% | 69.5% |
| 3804088 | 109.4.1.1292 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3 | 0.52 | 46.0 | 4.24e-01 | 96.4% | 76.0% |
| 3641692 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.52 | 44.0 | 4.10e-01 | 92.0% | 79.4% |
| 3394687 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 43.0 | 4.26e-01 | 89.8% | 87.6% |
D3
medium
residues 268-423
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4leuA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 57.0 | 5.47e-01 | 87.2% | 78.6% |
| 5m9dA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 49.0 | 5.20e-01 | 79.5% | 98.6% |
| 2b6cA02 | 1.25.40.290 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains | 0.64 | 40.0 | 4.91e-01 | 76.9% | 100.0% |
| 3efzB00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.64 | 45.0 | 4.04e-01 | 72.4% | 84.9% |
| 1elrA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 45.0 | 4.87e-01 | 71.8% | 89.8% |
| 3jckC00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 57.0 | 4.34e-01 | 100.0% | 60.8% |
| 2dbaA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 43.0 | 4.87e-01 | 72.4% | 92.4% |
| 6hftA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 44.0 | 4.80e-01 | 73.1% | 90.6% |
| 4y6cA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 49.0 | 4.47e-01 | 85.3% | 72.2% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 44.0 | 4.57e-01 | 73.7% | 89.6% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 45.0 | 4.50e-01 | 75.6% | 84.8% |
| 2hr2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 45.0 | 4.58e-01 | 77.6% | 91.7% |
| 3zpjA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 54.0 | 4.15e-01 | 99.4% | 55.3% |
| 5cl3A00 | 1.25.10.90 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › | 0.60 | 49.0 | 4.33e-01 | 88.5% | 67.1% |
| 3l9tA02 | 1.25.40.290 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains | 0.59 | 42.0 | 4.64e-01 | 73.1% | 94.9% |
| 2q7fA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 47.0 | 4.40e-01 | 89.1% | 68.0% |
| 3q15B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 52.0 | 4.13e-01 | 100.0% | 64.8% |
| 3gz1A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 41.0 | 4.22e-01 | 74.4% | 77.8% |
| 3p5pA02 | 1.50.10.160 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.57 | 44.0 | 4.11e-01 | 82.7% | 94.1% |
| 1ihgA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 43.0 | 4.48e-01 | 80.1% | 91.0% |
| 5l0wB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 43.0 | 4.53e-01 | 80.8% | 89.9% |
| 4nrhB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 45.0 | 4.37e-01 | 85.9% | 95.9% |
| 4lctB00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 49.0 | 3.78e-01 | 97.4% | 60.3% |
| 1qqfA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.54 | 47.0 | 4.04e-01 | 99.4% | 98.6% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3821403 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.72 | 60.0 | 5.55e-01 | 87.8% | 74.9% |
| 3332999 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.70 | 52.0 | 5.77e-01 | 87.2% | 100.0% |
| 3194379 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 62.0 | 3.76e-01 | 100.0% | 27.7% |
| 4030510 | 109.4.1.1228 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_24 | 0.68 | 48.0 | 4.77e-01 | 71.8% | 71.9% |
| 3963201 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 48.0 | 4.93e-01 | 73.7% | 87.3% |
| 3253853 | 109.4.1.1665 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30377 | 0.67 | 54.0 | 4.25e-01 | 86.5% | 70.0% |
| 5049485 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 53.0 | 4.69e-01 | 85.9% | 76.1% |
| 3439872 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 51.0 | 4.82e-01 | 82.7% | 76.8% |
| 4042478 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.64 | 49.0 | 3.40e-01 | 85.9% | 23.8% |
| 3304019 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.64 | 52.0 | 4.29e-01 | 85.9% | 49.3% |
| 3742887 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 44.0 | 5.06e-01 | 71.8% | 95.7% |
| 3252898 | 109.4.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 | 0.63 | 53.0 | 4.63e-01 | 89.7% | 83.4% |
| 3286731 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 53.0 | 5.10e-01 | 91.0% | 92.6% |
| None | — | 0.62 | 48.0 | 4.67e-01 | 80.1% | 94.1% | |
| 5001561 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 56.0 | 4.09e-01 | 100.0% | 49.5% |
| 4609 | 109.4.1.124 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DNA_alkylation | 0.62 | 51.0 | 4.58e-01 | 87.8% | 72.8% |
| 3174125 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.62 | 53.0 | 4.28e-01 | 94.2% | 85.2% |
| 3713076 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 44.0 | 4.48e-01 | 73.1% | 83.3% |
| 60061 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 50.0 | 4.56e-01 | 88.5% | 72.3% |
| 3435822 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.61 | 49.0 | 4.79e-01 | 86.5% | 84.0% |
| 3781521 | 109.4.1.1437 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3, TPR_8 | 0.61 | 47.0 | 4.19e-01 | 80.8% | 64.1% |
| 3494769 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 47.0 | 4.53e-01 | 80.8% | 80.0% |
| 5047388 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.60 | 54.0 | 3.86e-01 | 96.8% | 65.3% |
| 3580680 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 49.0 | 3.93e-01 | 87.2% | 53.1% |
| 3358666 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.60 | 43.0 | 4.34e-01 | 73.7% | 73.8% |
| 3318169 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.60 | 50.0 | 5.12e-01 | 89.7% | 94.0% |
| 3452165 | 109.4.1.2305 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_12, TPR_16 | 0.60 | 47.0 | 4.38e-01 | 87.2% | 66.7% |
| 3738174 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.59 | 46.0 | 4.41e-01 | 82.1% | 77.2% |
| 3916050 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.59 | 52.0 | 4.71e-01 | 97.4% | 98.1% |
| 3744833 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.59 | 46.0 | 4.63e-01 | 82.1% | 99.4% |
| 3435332 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.58 | 52.0 | 4.76e-01 | 96.8% | 80.5% |
| 3269989 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 43.0 | 3.92e-01 | 78.2% | 65.1% |
| 3175271 | 109.4.1.901 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_GCN1 | 0.57 | 45.0 | 4.54e-01 | 83.3% | 98.1% |
| 4182586 | 109.4.1.83 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf | 0.57 | 52.0 | 3.47e-01 | 100.0% | 36.0% |
| 3487019 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 40.0 | 4.17e-01 | 90.4% | 81.4% |
| 3488105 | 109.4.1.295 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COP9_hel_rpt | 0.55 | 49.0 | 3.95e-01 | 98.1% | 75.1% |
| 3693613 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.52 | 47.0 | 3.22e-01 | 100.0% | 43.3% |
| 3459705 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 45.0 | 3.97e-01 | 96.8% | 94.2% |
| 3792668 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.51 | 40.0 | 3.58e-01 | 82.1% | 92.9% |
D4
medium
residues 424-509