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hypothetical_protein_psal_cds_1113
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_1113__YP_008438423__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438423 ↗
- Protein ID:
- hypothetical_protein_psal_cds_1113
- Kingdom:
- euk
Quality
67.2
mean pLDDT
Cluster
View cluster (27 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 119-290
D2
high
residues 301-323_344-507
D3
medium
residues 513-575_751-784
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1br2A03 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.56 | 37.0 | 3.77e-01 | 99.0% | 68.4% |
| 2ou6A00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.56 | 40.0 | 3.26e-01 | 74.2% | 90.7% |
| 2hxoA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 42.0 | 3.75e-01 | 82.5% | 93.8% |
| 3nkeA00 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.53 | 45.0 | 3.79e-01 | 99.0% | 71.0% |
| 4it1B01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 37.0 | 3.23e-01 | 76.3% | 79.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959781 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.55 | 41.0 | 2.81e-01 | 78.4% | 59.4% |
| 3179258 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 42.0 | 3.23e-01 | 87.6% | 85.2% |
| 3231735 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.52 | 45.0 | 3.72e-01 | 100.0% | 91.4% |
| 3681919 | 109.4.1.35 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT,HEAT_2 | 0.52 | 38.0 | 3.20e-01 | 77.3% | 58.2% |
| 3928336 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.51 | 45.0 | 3.57e-01 | 100.0% | 88.3% |
| 4026826 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.50 | 36.0 | 3.32e-01 | 76.3% | 78.5% |
D4
medium
residues 576-624_655-675_690-750