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hypothetical_protein_psal_cds_1126

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_1126__YP_008438443__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438443 ↗
Protein ID:
hypothetical_protein_psal_cds_1126
Kingdom:
euk

Quality

68.0 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-105
PDB
D2 high residues 116-266
PDB
Domain cluster: representative
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.79 60.0 6.75e-01 91.4% 99.2%
4rlcA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.72 61.0 6.44e-01 100.0% 99.3%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.71 62.0 6.24e-01 91.4% 100.0%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.68 58.0 5.78e-01 89.4% 87.1%
2vdfA00 2.40.128.100 Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin 0.66 61.0 5.29e-01 98.7% 100.0%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.66 62.0 6.14e-01 99.3% 98.7%
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.66 50.0 5.54e-01 94.7% 100.0%
2lhfA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.65 60.0 5.70e-01 99.3% 100.0%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 50.0 4.94e-01 94.7% 75.8%
1tlyA00 2.40.230.20 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like 0.64 56.0 4.70e-01 93.4% 85.3%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.64 54.0 4.03e-01 89.4% 95.9%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 54.0 5.04e-01 96.7% 73.9%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.63 57.0 4.67e-01 98.0% 90.7%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 51.0 5.17e-01 100.0% 85.5%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 56.0 5.46e-01 100.0% 87.9%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 50.0 5.10e-01 100.0% 85.8%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.62 56.0 5.72e-01 97.4% 100.0%
5dl5A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.62 49.0 3.60e-01 83.4% 93.8%
1ew3A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 46.0 4.53e-01 97.4% 72.3%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.62 56.0 4.65e-01 99.3% 89.6%
1t16A00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.62 55.0 3.97e-01 96.7% 94.6%
1wubA00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.61 55.0 5.26e-01 98.0% 99.4%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.61 43.0 2.90e-01 70.9% 27.6%
4meeA00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.61 53.0 4.28e-01 95.4% 91.4%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.60 55.0 4.69e-01 98.7% 86.4%
2ynkA00 2.40.160.130 Mainly Beta › Beta Barrel › Porin › Capsule assembly protein Wzi 0.59 51.0 3.66e-01 92.1% 96.8%
5w17A01 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.59 49.0 4.99e-01 94.0% 88.0%
5dl7A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.59 48.0 3.57e-01 87.4% 96.8%
3mi6A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.58 44.0 3.54e-01 80.8% 92.6%
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 46.0 4.77e-01 99.3% 90.2%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.56 47.0 3.47e-01 91.4% 98.3%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.56 45.0 4.62e-01 86.1% 93.2%
5dl8A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.56 44.0 3.30e-01 84.1% 95.7%
1ygaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 46.0 3.56e-01 88.7% 95.8%
3nreA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 45.0 3.68e-01 88.1% 92.4%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 33.0 3.90e-01 70.2% 84.3%
1k1yB02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 45.0 3.81e-01 87.4% 95.6%
3vy8X00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.55 47.0 3.63e-01 92.1% 71.0%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 38.0 4.46e-01 78.1% 100.0%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.54 45.0 3.07e-01 88.7% 31.6%
4k3bA06 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.54 48.0 3.58e-01 96.0% 44.2%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.54 44.0 3.57e-01 88.7% 93.9%
2xn1A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.53 44.0 3.49e-01 88.1% 91.3%
3qlbA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.53 44.0 3.02e-01 88.7% 32.7%
3f7xA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 43.0 4.55e-01 86.1% 98.5%
3ty1A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 46.0 3.38e-01 92.7% 90.9%
2w1zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 38.0 3.94e-01 94.0% 79.4%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.52 43.0 3.59e-01 87.4% 88.1%
4fzlA02 3.30.450.400 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Colicin M, catalytic domain 0.52 41.0 4.10e-01 82.8% 80.9%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.52 47.0 4.46e-01 98.7% 98.9%
3cslA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.52 43.0 2.83e-01 88.1% 43.2%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 47.0 4.63e-01 97.4% 98.7%
4jrnA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 37.0 3.85e-01 94.0% 79.4%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 35.0 4.06e-01 86.1% 95.5%
4frxA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.51 40.0 2.99e-01 82.8% 73.9%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.50 43.0 3.47e-01 90.7% 60.6%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.50 44.0 3.15e-01 93.4% 40.0%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1117891 9.2.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin 0.76 58.0 6.47e-01 90.7% 96.7%
4152335 9.2.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin 0.76 56.0 6.17e-01 88.1% 91.9%
4928158 9.13.1.0 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.76 59.0 6.33e-01 86.1% 91.7%
3838398 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.72 65.0 6.09e-01 96.0% 95.0%
191268 5084.1.1.9 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagL 0.71 62.0 6.24e-01 91.4% 100.0%
4224449 5084.1.1.29 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.70 66.0 6.28e-01 100.0% 99.4%
4285298 5084.1.1.29 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.70 65.0 5.95e-01 98.7% 99.5%
3839432 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.70 64.0 5.67e-01 98.0% 90.0%
3970312 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.70 65.0 6.09e-01 99.3% 99.4%
3404339 9.2.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin 0.69 55.0 5.83e-01 96.7% 92.6%
4042627 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.69 64.0 6.19e-01 100.0% 100.0%
3971597 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.69 56.0 4.24e-01 86.1% 98.0%
3837982 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.67 63.0 5.92e-01 100.0% 96.1%
4279299 5084.1.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.67 61.0 5.78e-01 98.0% 98.9%
3386238 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.66 60.0 4.65e-01 97.4% 90.9%
3387592 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.66 57.0 4.27e-01 91.4% 99.2%
6334 331.3.1.7 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.63 51.0 5.23e-01 100.0% 88.4%
3593049 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.62 55.0 4.93e-01 96.0% 99.0%
3701306 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.62 55.0 4.92e-01 96.0% 99.0%
4440914 5084.5.3.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.62 51.0 3.33e-01 88.1% 82.5%
3945018 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.61 49.0 3.62e-01 84.1% 96.4%
3608121 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.61 42.0 3.50e-01 78.8% 40.5%
4009646 5084.3.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.60 55.0 4.34e-01 97.4% 72.2%
3974218 5084.5.2.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › DUF1302 0.60 48.0 3.47e-01 83.4% 96.3%
2045057 9.5.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI 0.60 52.0 5.13e-01 94.0% 100.0%
3964588 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.59 52.0 4.05e-01 93.4% 58.9%
3952882 331.3.1.27 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 0.59 54.0 5.13e-01 98.7% 91.4%
1734925 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.59 48.0 3.57e-01 87.4% 96.8%
None — 0.58 50.0 3.90e-01 91.4% 100.0%
3975988 5084.3.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.58 53.0 4.45e-01 99.3% 70.0%
1883909 5084.5.3.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.58 42.0 2.73e-01 73.5% 24.9%
3550298 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.58 52.0 4.90e-01 97.4% 87.2%
3273410 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.57 51.0 4.77e-01 96.0% 87.6%
4075543 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.57 48.0 3.84e-01 91.4% 98.4%
4621250 12.3.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.57 44.0 3.47e-01 80.8% 90.2%
3270444 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.57 50.0 4.78e-01 97.4% 86.7%
3727278 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.56 48.0 4.31e-01 94.0% 87.4%
4604561 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.55 51.0 3.76e-01 98.7% 83.2%
3784499 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.55 48.0 4.49e-01 94.0% 87.6%
3559721 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.55 49.0 4.57e-01 96.0% 89.2%
4028624 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.55 47.0 3.77e-01 91.4% 81.0%
4361190 883.1.1.18 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26545 0.55 49.0 4.74e-01 100.0% 98.3%
3481772 331.9.1.4 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla 0.54 33.0 3.64e-01 86.1% 73.2%
3909372 5087.1.1.1 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell 0.54 41.0 3.73e-01 88.7% 58.0%
3944979 5084.5.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.54 44.0 3.88e-01 86.1% 83.6%
1307904 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.54 43.0 3.21e-01 85.4% 96.2%
3809562 883.1.1.20 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › SMP_MUG190-like 0.54 49.0 4.45e-01 100.0% 88.0%
4466055 12.3.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.54 44.0 3.51e-01 88.7% 88.6%
1148155 12.3.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.54 44.0 3.45e-01 88.1% 87.9%
3897238 12.3.1.42 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 0.53 44.0 3.62e-01 86.8% 92.5%
4029737 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 39.0 2.48e-01 76.8% 15.6%
3646327 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.53 46.0 4.57e-01 96.7% 89.4%
139039 12.3.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.53 44.0 3.45e-01 88.7% 91.5%
3282535 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.53 43.0 3.60e-01 87.4% 87.7%
3420734 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.51 42.0 3.66e-01 88.1% 74.0%
3980013 5084.8.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.51 42.0 3.03e-01 88.1% 31.6%
3674091 9.23.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin 0.51 41.0 3.77e-01 98.7% 64.0%
4188949 5084.10.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD 0.50 45.0 3.08e-01 98.0% 91.5%