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hypothetical_protein_psal_cds_1157

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_1157__YP_009430128__Pandoravirus_salinus__1349410

Identity

Accession:
YP_009430128 ↗
Protein ID:
hypothetical_protein_psal_cds_1157
Kingdom:
euk

Quality

79.5 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (53 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 217-319
PDB
Domain cluster: rep: hypothetical_protein_psal_cds_895__YP_009430090__Pandoravirus_salinus__1349410__D186-270
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4cymD00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 66.0 5.62e-01 100.0% 84.4%
3hraA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 67.0 5.31e-01 100.0% 70.9%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.72 66.0 4.63e-01 100.0% 35.1%
5eidA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.72 64.0 6.05e-01 98.1% 86.2%
3keaA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.70 63.0 4.57e-01 100.0% 41.7%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 55.0 4.53e-01 100.0% 70.1%
4leuA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 53.0 4.45e-01 99.0% 64.3%
3woyA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.60 52.0 4.08e-01 100.0% 56.5%
7zcvA02 1.25.40.400 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 50.0 4.06e-01 100.0% 65.2%
3l9tA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.57 47.0 4.54e-01 91.3% 84.7%
6dewA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 45.0 3.73e-01 88.3% 83.2%
2bl7A00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.52 28.0 3.11e-01 79.6% 64.6%
1uqtA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 45.0 3.55e-01 100.0% 70.8%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.51 35.0 3.23e-01 72.8% 69.2%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4877405 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.74 67.0 5.07e-01 100.0% 59.6%
3747585 109.3.1.163 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.73 66.0 5.00e-01 100.0% 48.6%
3725739 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.72 66.0 5.06e-01 100.0% 52.4%
3456288 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.72 65.0 5.23e-01 100.0% 62.5%
3695127 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.70 64.0 5.35e-01 100.0% 80.6%
3253180 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.70 60.0 4.69e-01 92.2% 55.3%
3686590 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.69 63.0 5.17e-01 100.0% 76.2%
3411250 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.67 59.0 5.74e-01 98.1% 97.4%
3252617 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 60.0 4.05e-01 100.0% 32.1%
3721073 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.66 59.0 5.40e-01 100.0% 78.5%
4029634 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 45.0 4.01e-01 71.8% 94.0%
3613340 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 54.0 3.60e-01 100.0% 25.4%
3802150 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.59 51.0 3.99e-01 99.0% 51.9%
3921851 109.4.1.1223 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DOP1B 0.59 50.0 4.19e-01 100.0% 78.0%
3664730 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.58 51.0 3.73e-01 100.0% 46.9%
3663500 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.58 50.0 4.57e-01 100.0% 83.4%
3361839 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.53 44.0 4.12e-01 95.1% 77.8%
3688347 109.23.1.3 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 › BCD_RFX 0.51 45.0 3.89e-01 100.0% 80.6%
3683835 109.4.1.218 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAP 0.50 39.0 3.76e-01 85.4% 72.8%
D2 medium residues 320-409
PDB
Domain cluster: rep: hypothetical_protein_psal_cds_894__YP_009430089__Pandoravirus_salinus__1349410__D328-426
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wdyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 69.0 4.72e-01 100.0% 55.8%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 69.0 4.62e-01 100.0% 38.3%
2zgdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 61.0 5.95e-01 88.9% 81.4%
7xceA01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 68.0 4.84e-01 100.0% 48.4%
5eidA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 68.0 6.03e-01 100.0% 95.1%
5cecB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 67.0 5.15e-01 100.0% 62.7%
6jd6B00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.72 66.0 5.10e-01 100.0% 61.5%
5z2mB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.71 65.0 5.62e-01 100.0% 86.9%
1ympA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.70 65.0 5.68e-01 100.0% 85.5%
3twqA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.70 64.0 5.19e-01 100.0% 72.6%
4cymD00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.70 63.0 5.13e-01 100.0% 59.9%
1gu9C00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.69 47.0 3.82e-01 70.0% 54.2%
2qeuB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.64 49.0 4.33e-01 82.2% 85.7%
2af7D00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.64 50.0 4.57e-01 85.6% 79.3%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.63 50.0 4.87e-01 86.7% 82.2%
3ljnA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.61 54.0 3.77e-01 100.0% 33.6%
3beyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.58 41.0 4.12e-01 73.3% 84.0%
4g26A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 50.0 3.46e-01 95.6% 56.3%
1qqeA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 45.0 3.30e-01 92.2% 34.2%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.54 47.0 4.55e-01 93.3% 95.0%
3i3nA01 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.54 42.0 3.72e-01 96.7% 56.5%
7yb9A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 46.0 3.55e-01 98.9% 48.2%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3257672 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.86 73.0 4.35e-01 100.0% 14.3%
4017980 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.78 73.0 5.73e-01 100.0% 61.1%
3273023 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.76 67.0 4.23e-01 95.6% 44.2%
3484295 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.74 69.0 4.77e-01 100.0% 39.6%
3267273 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.73 68.0 6.23e-01 100.0% 84.3%
3922830 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.73 68.0 5.11e-01 100.0% 59.0%
3498689 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.73 67.0 4.28e-01 100.0% 33.2%
3749173 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.73 66.0 6.16e-01 97.8% 82.7%
3252795 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.73 66.0 4.89e-01 100.0% 52.0%
3728634 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.72 66.0 4.64e-01 100.0% 47.0%
3259554 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.72 66.0 4.83e-01 100.0% 46.5%
3577938 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.72 66.0 4.67e-01 100.0% 50.0%
3536600 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.71 65.0 5.33e-01 100.0% 61.3%
3788115 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.70 64.0 4.80e-01 100.0% 57.2%
4247725 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.69 63.0 4.14e-01 100.0% 28.3%
3701880 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 61.0 4.87e-01 100.0% 82.6%
3263034 4003.1.1.0 ↗ alpha arrays › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins 0.68 59.0 4.82e-01 95.6% 63.0%
3276299 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.67 59.0 4.86e-01 94.4% 54.8%
4584852 109.4.1.923 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › AEP1 0.66 60.0 4.76e-01 100.0% 81.7%
3276054 109.4.1.1349 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29011 0.66 60.0 3.65e-01 100.0% 17.4%
3378962 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.65 56.0 4.76e-01 93.3% 62.1%
3196470 109.59.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain 0.65 45.0 4.59e-01 72.2% 92.1%
3830116 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.65 59.0 4.58e-01 100.0% 66.3%
3321683 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.65 58.0 3.98e-01 100.0% 37.2%
3612425 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 50.0 3.92e-01 84.4% 60.5%
3193793 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.64 57.0 3.56e-01 100.0% 22.5%
3338123 109.4.1.1335 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif 0.62 56.0 3.49e-01 100.0% 21.0%
3667727 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.62 57.0 4.09e-01 100.0% 53.7%
4981494 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.62 49.0 4.63e-01 86.7% 89.1%
5076342 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.61 49.0 4.77e-01 87.8% 96.0%
3375267 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.60 54.0 4.14e-01 100.0% 52.7%
3298955 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.60 54.0 3.54e-01 98.9% 25.1%
3296368 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.60 52.0 4.13e-01 100.0% 56.9%
3338769 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.60 53.0 3.64e-01 100.0% 33.8%
3810049 109.4.1.1261 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.59 53.0 4.32e-01 100.0% 71.8%
3367887 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 52.0 4.75e-01 98.9% 81.7%
3342131 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.59 52.0 3.77e-01 100.0% 40.4%
3374152 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.59 53.0 4.75e-01 100.0% 79.2%
3337553 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.58 50.0 4.31e-01 94.4% 61.4%
3812203 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 50.0 3.99e-01 100.0% 75.3%
3469557 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.57 51.0 3.95e-01 100.0% 56.0%
3371306 109.4.1.1566 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, PF30481, PF30484 0.57 50.0 2.97e-01 100.0% 22.1%
3315271 109.4.1.1597 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30481, PF30484 0.56 49.0 2.87e-01 100.0% 19.1%
3814497 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.55 43.0 3.51e-01 84.4% 92.0%
4468767 109.4.1.758 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med26 0.55 45.0 3.67e-01 95.6% 68.4%
3307130 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.54 47.0 3.91e-01 98.9% 64.2%
3809438 109.40.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C 0.53 43.0 4.01e-01 92.2% 88.3%
3467518 109.4.1.202 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.52 47.0 3.32e-01 98.9% 56.7%
3370077 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.51 42.0 3.66e-01 94.4% 84.7%
3323616 109.4.1.2331 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, PF30481, PF30484 0.50 44.0 2.90e-01 98.9% 25.3%
D3 medium residues 410-467
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.82 75.0 5.42e-01 100.0% 40.7%
7xceA01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.81 74.0 4.77e-01 100.0% 24.6%
1wdyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 72.0 4.50e-01 100.0% 21.1%
4zhbA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 70.0 5.78e-01 100.0% 61.5%
4qfvC02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.78 67.0 6.50e-01 94.8% 90.8%
1wy6A00 1.25.40.350 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.71 60.0 4.47e-01 100.0% 42.8%
1avcA07 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.63 49.0 4.61e-01 89.7% 86.7%
2fefA02 1.10.3920.10 Mainly Alpha › Orthogonal Bundle › PA2201 C-terminal domain-like › PA2201 C-terminal domain-like 0.56 47.0 3.57e-01 100.0% 51.9%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.56 43.0 3.51e-01 86.2% 74.6%
2qw6D00 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.55 45.0 4.08e-01 96.6% 80.2%
3h37A02 1.10.110.30 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › 0.55 42.0 3.86e-01 93.1% 95.3%
4c0aA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.52 42.0 3.89e-01 98.3% 90.1%
1vw4T01 6.10.330.20 Special › Helix non-globular › Monooxygenase › 0.51 41.0 3.41e-01 94.8% 69.6%
3a32A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 38.0 2.48e-01 87.9% 61.4%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3265998 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.85 75.0 5.04e-01 100.0% 27.8%
3253180 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.84 74.0 4.95e-01 100.0% 26.5%
3877147 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.82 74.0 4.53e-01 100.0% 18.8%
3248778 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.81 73.0 4.37e-01 100.0% 17.3%
3446914 109.3.1.166 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 0.81 72.0 4.60e-01 100.0% 22.6%
3274514 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.80 72.0 4.86e-01 100.0% 34.6%
4018293 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.80 72.0 4.68e-01 100.0% 26.0%
3276119 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.79 69.0 4.53e-01 100.0% 24.9%
3368921 109.4.1.1272 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.71 59.0 3.37e-01 98.3% 9.1%
3378462 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.70 60.0 4.18e-01 100.0% 34.1%
3682571 109.4.1.1761 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long, E_motif 0.68 57.0 4.12e-01 100.0% 33.2%
3653175 109.4.1.1156 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif 0.67 58.0 4.44e-01 100.0% 47.9%
3806181 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.66 56.0 4.45e-01 100.0% 51.5%
3305040 109.4.1.1156 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif 0.65 56.0 4.23e-01 100.0% 42.7%
3428375 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.63 53.0 4.33e-01 98.3% 53.9%
3502362 601.54.1.3 ↗ alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 › MTABC_N 0.56 42.0 3.10e-01 87.9% 78.9%
D4 medium residues 468-523
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2c5iT00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 59.0 5.01e-01 83.9% 87.2%
4mk3A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.73 64.0 5.11e-01 100.0% 88.7%
5fhiA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.69 59.0 4.50e-01 100.0% 74.1%
1fbwA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.67 55.0 3.35e-01 96.4% 28.2%
2psmA00 1.20.1250.70 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 0.67 50.0 3.93e-01 80.4% 63.2%
3ha4B00 1.20.58.690 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 57.0 4.58e-01 100.0% 71.7%
2yk0A03 1.20.58.1930 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 53.0 3.56e-01 91.1% 80.2%
3ihvA03 1.25.40.900 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 47.0 3.69e-01 87.5% 41.7%
4g26A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 50.0 3.29e-01 100.0% 20.3%
2kd1A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.61 51.0 4.15e-01 100.0% 60.2%
1k8kG00 1.25.40.190 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Actin-related protein 2/3 complex subunit 5 0.60 50.0 3.89e-01 100.0% 61.2%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 41.0 3.47e-01 80.4% 84.8%
2vl6A01 3.30.1640.10 Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1 0.54 44.0 3.72e-01 94.6% 92.9%
1u2xA02 3.30.1110.20 Alpha Beta › 2-Layer Sandwich › Adenosine kinase, small domain › 0.53 44.0 3.56e-01 100.0% 68.9%
3kflA02 2.170.220.10 Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › 0.52 32.0 2.53e-01 82.1% 28.9%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.60e-01 85.7% 70.7%
4mtdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.49e-01 85.7% 68.2%
3dplC03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.59e-01 87.5% 78.3%
2l9bA00 1.25.40.630 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 42.0 3.69e-01 96.4% 91.2%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4955947 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.72 51.0 4.66e-01 75.0% 89.3%
3453923 109.4.1.1365 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, TPR_24 0.68 57.0 4.77e-01 100.0% 61.9%
3381150 109.4.1.1277 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.66 55.0 3.60e-01 100.0% 23.1%
3422293 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.66 55.0 4.61e-01 100.0% 61.9%
3455615 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.66 55.0 3.85e-01 100.0% 29.4%
3823524 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.66 55.0 4.36e-01 100.0% 50.4%
3339002 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.66 56.0 5.19e-01 100.0% 89.3%
3354084 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.65 56.0 4.64e-01 100.0% 54.3%
3300364 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.65 54.0 3.73e-01 100.0% 36.3%
3643652 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.65 53.0 4.13e-01 100.0% 45.5%
3428376 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.65 54.0 3.78e-01 100.0% 33.2%
3341298 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 54.0 4.05e-01 100.0% 44.5%
3654612 109.4.1.1260 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.64 50.0 3.75e-01 91.1% 49.4%
3373217 109.4.1.1275 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 0.64 53.0 3.15e-01 100.0% 13.0%
3306582 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.64 56.0 3.42e-01 100.0% 18.6%
3308046 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.64 54.0 4.50e-01 100.0% 58.1%
4504172 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.63 52.0 4.34e-01 96.4% 67.6%
3743465 3184.1.1.1 ↗ alpha bundles › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › CSTF2_hinge 0.63 44.0 4.22e-01 73.2% 81.5%
3343549 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.63 54.0 4.47e-01 100.0% 61.0%
3306314 109.4.1.1261 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.63 52.0 3.83e-01 100.0% 36.6%
3420221 109.4.1.1261 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.62 53.0 3.52e-01 100.0% 26.1%
3353463 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.62 54.0 3.90e-01 100.0% 37.0%
3362227 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.62 50.0 3.75e-01 100.0% 38.2%
3656517 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.61 50.0 3.60e-01 100.0% 33.3%
3378146 109.4.1.361 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NPH3 0.61 53.0 3.33e-01 100.0% 26.8%
3665059 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 48.0 4.12e-01 100.0% 59.0%
5030400 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.55 43.0 3.65e-01 94.6% 59.1%
4950386 138.1.1.2 ↗ alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C 0.54 39.0 3.40e-01 82.1% 85.0%
3219633 109.4.1.1149 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IFT121 0.54 44.0 3.88e-01 100.0% 70.5%
3796817 207.1.1.114 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_TMOD-LMOD 0.54 46.0 3.10e-01 100.0% 24.3%
3485417 528.1.1.1 ↗ alpha bundles › ADP-ribosylglycohydrolase › ADP-ribosylglycohydrolase › ADP-ribosylglycohydrolase › ADP_ribosyl_GH 0.53 43.0 2.77e-01 100.0% 57.4%
4964972 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.67e-01 80.4% 98.4%
4945999 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 3.47e-01 83.9% 76.5%
4952959 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.51 38.0 3.62e-01 85.7% 72.9%
5048054 2011.1.1.8 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.50 42.0 2.77e-01 98.2% 67.5%