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hypothetical_protein_psal_cds_1183
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_1183__YP_008438543__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438543 ↗
- Protein ID:
- hypothetical_protein_psal_cds_1183
- Kingdom:
- euk
Quality
77.0
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-84
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1oyzA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.76 | 57.0 | 3.72e-01 | 100.0% | 19.0% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.74 | 59.0 | 4.44e-01 | 100.0% | 35.9% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.72 | 54.0 | 5.26e-01 | 81.2% | 94.3% |
| 2qyuA02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.71 | 55.0 | 3.81e-01 | 92.2% | 26.7% |
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.71 | 52.0 | 4.86e-01 | 85.9% | 62.5% |
| 3ayjA02 | 3.90.660.60 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.70 | 52.0 | 3.36e-01 | 81.2% | 41.0% |
| 1q6aA00 | 1.10.1240.30 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain | 0.69 | 56.0 | 4.81e-01 | 92.2% | 83.2% |
| 4jvyB00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.69 | 48.0 | 3.48e-01 | 75.0% | 96.3% |
| 4hojA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.68 | 61.0 | 5.19e-01 | 100.0% | 68.0% |
| 3ppuB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.68 | 59.0 | 4.95e-01 | 100.0% | 67.3% |
| 4hfkB00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 48.0 | 4.25e-01 | 78.1% | 54.1% |
| 4ikhA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 55.0 | 4.44e-01 | 93.8% | 68.5% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.66 | 57.0 | 4.75e-01 | 100.0% | 70.9% |
| 5bz1A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.65 | 56.0 | 3.47e-01 | 96.9% | 25.1% |
| 4ofzA01 | 1.20.58.1800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 56.0 | 4.68e-01 | 98.4% | 86.7% |
| 4by6D02 | 1.25.40.800 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.64 | 55.0 | 3.83e-01 | 98.4% | 51.1% |
| 1lm3B00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.63 | 55.0 | 4.71e-01 | 100.0% | 84.0% |
| 3gzkA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.63 | 53.0 | 3.26e-01 | 100.0% | 24.8% |
| 4hbdA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.63 | 52.0 | 3.60e-01 | 96.9% | 42.9% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 51.0 | 3.99e-01 | 96.9% | 60.4% |
| 7kdtA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 52.0 | 3.36e-01 | 98.4% | 19.3% |
| 2fm8C01 | 1.10.4150.10 | Mainly Alpha › Orthogonal Bundle › SipA N-terminal domain-like › SipA N-terminal domain-like | 0.60 | 49.0 | 3.54e-01 | 93.8% | 51.5% |
| 1orsC00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.59 | 50.0 | 4.05e-01 | 100.0% | 74.2% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 3.44e-01 | 81.2% | 86.6% |
| 1bxiA00 | 1.10.1200.20 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Colicin E immunity protein | 0.58 | 45.0 | 4.20e-01 | 100.0% | 66.3% |
| 2zo4A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 38.0 | 4.33e-01 | 87.5% | 89.8% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 47.0 | 3.67e-01 | 90.6% | 71.8% |
| 2jfrA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.57 | 51.0 | 3.46e-01 | 100.0% | 63.2% |
| 2o5hA00 | 1.10.3510.10 | Mainly Alpha › Orthogonal Bundle › NMB0513-like › NMB0513-like | 0.57 | 50.0 | 4.01e-01 | 100.0% | 49.2% |
| 3v3sA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 47.0 | 3.18e-01 | 98.4% | 70.3% |
| 1h2tC03 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 44.0 | 3.10e-01 | 98.4% | 43.4% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.54 | 43.0 | 4.22e-01 | 89.1% | 84.3% |
| 1mukA02 | 3.90.1850.10 | Alpha Beta › Alpha-Beta Complex › RNA-directed RNA polymerase lambda-3 › RNA-directed RNA polymerase lambda-3 | 0.52 | 45.0 | 2.68e-01 | 100.0% | 12.9% |
| 3d3oA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 37.0 | 2.83e-01 | 82.8% | 38.6% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 41.0 | 3.33e-01 | 98.4% | 45.2% |
| 7z7vE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.50 | 39.0 | 4.06e-01 | 89.1% | 95.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 224060 | 3631.1.1.0 ↗ | 0.71 | 52.0 | 4.88e-01 | 85.9% | 63.3% | |
| 3506590 | 109.4.1.615 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FANCI_S3,FANCI_S4 | 0.70 | 63.0 | 3.85e-01 | 100.0% | 34.4% |
| 3562276 | 389.1.1.119 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › BRINP | 0.69 | 61.0 | 5.28e-01 | 98.4% | 75.0% |
| 3738124 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.69 | 55.0 | 3.23e-01 | 87.5% | 14.2% |
| 3700945 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 62.0 | 3.92e-01 | 100.0% | 33.7% |
| 3858940 | 109.4.1.2036 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, Cohesin_HEAT, HEAT_2, PDS5 | 0.69 | 58.0 | 3.38e-01 | 95.3% | 25.8% |
| 4133970 | 109.4.1.3342 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2, PDS5 | 0.68 | 58.0 | 3.35e-01 | 95.3% | 24.5% |
| None | — | 0.67 | 54.0 | 3.04e-01 | 89.1% | 8.0% | |
| 3621947 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.67 | 57.0 | 4.94e-01 | 95.3% | 66.0% |
| 3226696 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 57.0 | 4.11e-01 | 98.4% | 48.4% |
| 3176040 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.65 | 57.0 | 3.65e-01 | 100.0% | 36.6% |
| 3311170 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.64 | 56.0 | 3.96e-01 | 100.0% | 60.0% |
| 3937021 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.64 | 56.0 | 3.61e-01 | 100.0% | 35.5% |
| 4003485 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 54.0 | 4.34e-01 | 98.4% | 74.8% |
| 5074875 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.62 | 51.0 | 4.57e-01 | 100.0% | 64.4% |
| 3901597 | 5054.1.1.4 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans,Ion_trans_N | 0.62 | 54.0 | 3.48e-01 | 100.0% | 41.6% |
| 3313709 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.62 | 54.0 | 3.08e-01 | 100.0% | 21.3% |
| None | — | 0.62 | 54.0 | 3.09e-01 | 100.0% | 21.4% | |
| 3819479 | 109.4.1.1743 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26752 | 0.60 | 50.0 | 3.16e-01 | 92.2% | 34.9% |
| 3218298 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.58 | 48.0 | 2.96e-01 | 100.0% | 20.4% |
| 4058772 | 2008.1.1.82 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RRG7 | 0.56 | 46.0 | 3.20e-01 | 90.6% | 88.4% |
| 3782040 | 101.1.22.0 ↗ | alpha arrays › HTH › HTH › double HTH | 0.55 | 48.0 | 4.01e-01 | 100.0% | 59.1% |
| 5054103 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 42.0 | 4.15e-01 | 93.8% | 77.1% |
| 5068034 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 42.0 | 3.49e-01 | 95.3% | 47.8% |
| 3784236 | 807.1.1.0 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) | 0.53 | 39.0 | 3.43e-01 | 98.4% | 50.0% |
| 3316879 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.52 | 44.0 | 2.67e-01 | 100.0% | 21.2% |
| 5080175 | 3754.1.1.1 ↗ | alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4 | 0.52 | 45.0 | 2.93e-01 | 100.0% | 65.1% |
| 3680362 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.52 | 44.0 | 2.59e-01 | 100.0% | 19.5% |
| 5049442 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 40.0 | 3.64e-01 | 85.9% | 67.8% |
D2
high
residues 92-198