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hypothetical_protein_psal_cds_1187

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_1187__YP_008438550__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438550 ↗
Protein ID:
hypothetical_protein_psal_cds_1187
Kingdom:
euk

Quality

73.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 291-424
PDB
Domain cluster: rep: hypothetical_protein_pmac_cds_765__YP_009481449__Pandoravirus_macleodensis__2107707__D242-370
D2 high residues 439-530
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp1179__YP_009120148__Pandoravirus_inopinatum__1605721__D70-169
D3 medium residues 78-139
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp0205__YP_009119174__Pandoravirus_inopinatum__1605721__D56-125
D4 medium residues 140-290
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k0nA00 1.10.246.20 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain 0.63 32.0 4.10e-01 76.2% 84.7%
6ko5A02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.55 38.0 3.09e-01 70.2% 56.5%
2dodA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.50 21.0 2.67e-01 86.8% 62.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3260123 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.53 40.0 3.77e-01 79.5% 93.2%
3927665 192.29.1.118 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Tcp11 0.53 38.0 3.94e-01 80.1% 80.0%
4257864 3281.1.1.1 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.53 47.0 3.36e-01 99.3% 74.9%