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hypothetical_protein_psal_cds_1198
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_1198__YP_009430132__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_009430132 ↗
- Protein ID:
- hypothetical_protein_psal_cds_1198
- Kingdom:
- euk
Quality
71.9
mean pLDDT
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-51_74-150_164-182
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.75 | 27.0 | 4.53e-01 | 82.7% | 91.7% |
| 7vhqU01 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.70 | 54.0 | 5.83e-01 | 80.3% | 100.0% |
| 3v9oA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.64 | 55.0 | 5.65e-01 | 96.1% | 96.7% |
| 2zuoA10 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.64 | 49.0 | 5.17e-01 | 81.1% | 100.0% |
| 2cg8C01 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.63 | 55.0 | 5.70e-01 | 94.5% | 99.2% |
| 1b9lA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.63 | 54.0 | 5.64e-01 | 96.1% | 99.2% |
| 2yzcA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.61 | 55.0 | 4.26e-01 | 99.2% | 47.4% |
| 2pk0A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.61 | 54.0 | 4.36e-01 | 96.9% | 66.8% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.59 | 24.0 | 3.66e-01 | 78.7% | 100.0% |
| 2vzsA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 31.0 | 3.46e-01 | 83.5% | 67.3% |
| 2r2cB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 32.0 | 3.47e-01 | 83.5% | 69.7% |
| 8alzB04 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 31.0 | 3.31e-01 | 84.3% | 66.4% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.51 | 39.0 | 3.77e-01 | 81.9% | 75.8% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5022726 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.77 | 27.0 | 4.38e-01 | 81.9% | 84.0% |
| 161965 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.75 | 60.0 | 6.56e-01 | 95.3% | 100.0% |
| 3728098 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.71 | 59.0 | 5.51e-01 | 85.8% | 94.7% |
| 4463771 | 3347.1.1.0 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 | 0.71 | 35.0 | 3.85e-01 | 100.0% | 58.1% |
| 3253204 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.71 | 56.0 | 5.36e-01 | 83.5% | 82.8% |
| 4607183 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.70 | 56.0 | 5.70e-01 | 85.0% | 86.3% |
| 4649099 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.70 | 57.0 | 5.33e-01 | 85.0% | 96.0% |
| 2106023 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.69 | 55.0 | 5.93e-01 | 83.5% | 98.1% |
| 5059432 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.69 | 55.0 | 5.66e-01 | 83.5% | 95.8% |
| 3024609 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.69 | 56.0 | 5.68e-01 | 85.8% | 88.1% |
| 3390463 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.69 | 27.0 | 3.80e-01 | 91.3% | 72.3% |
| 3598969 | 230.6.1.0 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain | 0.69 | 55.0 | 5.53e-01 | 85.0% | 83.1% |
| 2138764 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.68 | 56.0 | 5.56e-01 | 85.8% | 83.2% |
| 3700023 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.68 | 54.0 | 5.54e-01 | 82.7% | 90.8% |
| 4015756 | 230.6.1.0 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain | 0.68 | 54.0 | 5.47e-01 | 85.0% | 84.8% |
| 3260338 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.68 | 55.0 | 5.61e-01 | 85.8% | 91.2% |
| 3060581 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.67 | 24.0 | 3.57e-01 | 81.9% | 73.2% |
| 3275852 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.67 | 56.0 | 5.23e-01 | 88.2% | 99.4% |
| 3487126 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.67 | 53.0 | 5.22e-01 | 82.7% | 80.0% |
| 3597939 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.67 | 56.0 | 5.57e-01 | 88.2% | 87.7% |
| 3496975 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.67 | 54.0 | 5.43e-01 | 85.8% | 87.7% |
| 3732337 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.67 | 54.0 | 5.40e-01 | 85.8% | 87.7% |
| 4944483 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.67 | 54.0 | 5.40e-01 | 85.8% | 87.7% |
| 4462886 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.67 | 54.0 | 5.35e-01 | 85.8% | 85.0% |
| 4991921 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.66 | 54.0 | 4.91e-01 | 85.8% | 69.1% |
| 3700069 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.66 | 55.0 | 5.77e-01 | 88.2% | 99.1% |
| 4946601 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.66 | 52.0 | 5.39e-01 | 83.5% | 99.2% |
| 4681330 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.66 | 54.0 | 4.79e-01 | 86.6% | 76.1% |
| 3781163 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.65 | 55.0 | 5.63e-01 | 96.9% | 94.2% |
| 3355174 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.65 | 53.0 | 5.49e-01 | 88.2% | 95.0% |
| 3944186 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.65 | 52.0 | 5.08e-01 | 85.8% | 88.6% |
| 3613688 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.64 | 49.0 | 4.88e-01 | 79.5% | 99.2% |
| 3724449 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.61 | 35.0 | 4.15e-01 | 98.4% | 81.1% |
| 4010270 | 210.2.1.3 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 | 0.60 | 55.0 | 4.35e-01 | 100.0% | 64.4% |
| 3245829 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 42.0 | 3.28e-01 | 74.8% | 77.5% |
| 5055106 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 41.0 | 3.61e-01 | 74.8% | 84.0% |
| 3758040 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 36.0 | 3.69e-01 | 82.7% | 66.7% |
| 3610755 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 31.0 | 3.24e-01 | 74.8% | 58.3% |
| 3626370 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.51 | 37.0 | 3.05e-01 | 74.0% | 77.8% |
| 3517477 | 2484.1.1.230 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 | 0.51 | 35.0 | 3.79e-01 | 93.7% | 84.8% |
| 4969815 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.51 | 39.0 | 3.18e-01 | 79.5% | 60.9% |
D2
high
residues 196-267