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hypothetical_protein_psal_cds_1224
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_1224__YP_008438617__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438617 ↗
- Protein ID:
- hypothetical_protein_psal_cds_1224
- Kingdom:
- euk
Quality
76.3
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 197-351
D2
high
residues 375-484
D3
high
residues 523-627
D4
medium
residues 30-44_83-196
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ljcA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 52.0 | 5.28e-01 | 88.4% | 88.1% |
| 7craA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 44.0 | 5.05e-01 | 72.9% | 100.0% |
| 6vbkB02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 36.0 | 4.36e-01 | 71.3% | 100.0% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.56 | 51.0 | 3.56e-01 | 99.2% | 84.0% |
| 5d91A02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.55 | 42.0 | 3.62e-01 | 93.8% | 51.5% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 42.0 | 3.81e-01 | 99.2% | 61.9% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 37.0 | 4.08e-01 | 76.0% | 98.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5019967 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.63 | 53.0 | 4.64e-01 | 93.8% | 61.1% |
| 4286470 | 5067.1.1.2 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › SecD_SecF | 0.61 | 42.0 | 3.63e-01 | 81.4% | 44.9% |
| 3286925 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.60 | 42.0 | 4.38e-01 | 71.3% | 100.0% |
| 3663497 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.58 | 36.0 | 3.41e-01 | 100.0% | 51.6% |
| 4596623 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.57 | 31.0 | 2.60e-01 | 96.9% | 28.1% |
| 4371507 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.53 | 38.0 | 4.38e-01 | 76.7% | 100.0% |
| 4397663 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.52 | 43.0 | 3.75e-01 | 88.4% | 93.5% |
| 3734712 | 604.3.1.11 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 | 0.52 | 47.0 | 3.59e-01 | 100.0% | 67.1% |
| 3654612 | 109.4.1.1260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long | 0.51 | 39.0 | 3.65e-01 | 86.8% | 64.6% |
| 3664940 | 192.4.1.22 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › PF26575 | 0.51 | 31.0 | 3.94e-01 | 72.1% | 100.0% |