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hypothetical_protein_psal_cds_1266
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_1266__YP_008438692__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438692 ↗
- Protein ID:
- hypothetical_protein_psal_cds_1266
- Kingdom:
- euk
Quality
62.6
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-35_233-258
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2h3hB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 57.0 | 4.14e-01 | 94.4% | 91.7% |
| 3g98A00 | 3.10.310.40 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.60 | 43.0 | 3.49e-01 | 79.6% | 76.6% |
| 2jroA01 | 3.30.1910.10 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › so0334 like domain | 0.59 | 40.0 | 3.88e-01 | 74.1% | 86.2% |
| 2ipcA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.58 | 43.0 | 2.91e-01 | 83.3% | 60.7% |
| 1j5yA02 | 3.30.1340.20 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain | 0.55 | 43.0 | 3.69e-01 | 100.0% | 72.9% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.54 | 36.0 | 3.78e-01 | 77.8% | 84.4% |
| 3onkA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 42.0 | 3.21e-01 | 90.7% | 59.1% |
| 2pfuA01 | 3.30.420.270 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.52 | 37.0 | 3.44e-01 | 88.9% | 58.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3775946 | 242.2.1.2 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_endo_N | 0.64 | 46.0 | 4.24e-01 | 79.6% | 100.0% |
| 3801118 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.63 | 43.0 | 4.11e-01 | 72.2% | 89.2% |
| 3435414 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.55 | 45.0 | 3.59e-01 | 92.6% | 77.4% |
| 3362234 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.55 | 43.0 | 3.63e-01 | 87.0% | 65.3% |
| 3443063 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.53 | 44.0 | 3.10e-01 | 92.6% | 46.7% |
| 3359983 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.53 | 43.0 | 3.50e-01 | 92.6% | 67.3% |
| 7636 | 4053.1.1.1 ↗ | a+b complex topology › Insertion domain in replication terminator protein (Tus) › Insertion domain in replication terminator protein (Tus) › Insertion domain in replication terminator protein (Tus) › Ter | 0.51 | 36.0 | 3.52e-01 | 79.6% | 66.1% |
| 3469624 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.51 | 42.0 | 3.80e-01 | 90.7% | 93.3% |
| 3332622 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.51 | 40.0 | 3.64e-01 | 87.0% | 76.0% |
D2
medium
residues 36-98_158-232_259-288