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hypothetical_protein_psal_cds_1276
Euk-VirPandoravirus_salinus
hypothetical_protein_psal_cds_1276__YP_008438711__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438711 ↗
- Protein ID:
- hypothetical_protein_psal_cds_1276
- Kingdom:
- euk
Quality
70.6
mean pLDDT
Cluster
View cluster (47 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 468-521
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ewcA03 | 1.20.120.1660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.68 | 46.0 | 4.16e-01 | 70.4% | 85.3% |
| 4uijA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.65 | 49.0 | 3.99e-01 | 96.3% | 42.3% |
| 1owaA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 50.0 | 4.14e-01 | 96.3% | 82.1% |
| 5ctrA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 51.0 | 3.19e-01 | 100.0% | 20.3% |
| 3l11A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 47.0 | 3.82e-01 | 94.4% | 87.5% |
| 3hi0A02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.56 | 46.0 | 3.31e-01 | 98.1% | 38.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3658649 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.70 | 53.0 | 4.16e-01 | 87.0% | 38.3% |
| 3969284 | 633.28.1.2 ↗ | alpha bundles › Bromodomain-like › Tsi6 › Tsi6 › DUF4404 | 0.66 | 55.0 | 4.78e-01 | 90.7% | 91.3% |
| 4001463 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.64 | 54.0 | 4.97e-01 | 100.0% | 78.7% |
| 3888296 | 3704.1.1.1 ↗ | alpha superhelices › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › APAF1_C | 0.58 | 47.0 | 3.54e-01 | 98.1% | 33.8% |
| 3196295 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 47.0 | 3.48e-01 | 96.3% | 48.0% |
| 3861990 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.56 | 49.0 | 3.66e-01 | 98.1% | 60.0% |
| 4400461 | 6028.1.1.0 ↗ | alpha bundles › Ribosome modulation factor › Ribosome modulation factor › Ribosome modulation factor | 0.56 | 42.0 | 3.93e-01 | 85.2% | 68.6% |
D2
medium
residues 522-636