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hypothetical_protein_psal_cds_1301

Euk-Vir

Pandoravirus_salinus

hypothetical_protein_psal_cds_1301__YP_008438754__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438754 ↗
Protein ID:
hypothetical_protein_psal_cds_1301
Kingdom:
euk

Quality

57.9 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-69
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF12937.13 best F-box-like 27.4 3.10e-06 93.9% 78.7%
PF00646.39 F-box 19.8 8.40e-04 85.7% 83.7%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p1oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.84 60.0 6.60e-01 75.5% 100.0%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.77 70.0 4.36e-01 100.0% 26.3%
4i6jB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.77 58.0 6.18e-01 85.7% 97.6%
5ibkB00 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.75 58.0 5.99e-01 87.8% 95.7%
3ogkB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.75 53.0 5.66e-01 77.6% 90.2%
3l2oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.75 59.0 4.93e-01 89.8% 90.9%
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.74 63.0 5.28e-01 98.0% 69.0%
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.70 59.0 4.75e-01 98.0% 84.0%
4npxA00 1.10.3350.10 Mainly Alpha › Orthogonal Bundle › HP0242-like fold › HP0242-like domain 0.63 36.0 3.04e-01 100.0% 32.5%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 41.0 3.61e-01 89.8% 51.2%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3245585 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.95 74.0 8.11e-01 81.6% 100.0%
3825169 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.92 68.0 7.09e-01 77.6% 86.7%
3238357 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 61.0 6.94e-01 71.4% 100.0%
3820691 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 67.0 7.27e-01 79.6% 97.5%
3231350 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.88 67.0 6.99e-01 87.8% 88.9%
3349711 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 65.0 6.75e-01 83.7% 88.9%
3239444 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 62.0 6.68e-01 77.6% 95.0%
3341479 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 67.0 5.93e-01 85.7% 60.0%
3831129 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 57.0 6.40e-01 71.4% 100.0%
3212367 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 63.0 6.82e-01 85.7% 100.0%
3463234 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 63.0 6.10e-01 81.6% 98.2%
3389442 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 67.0 6.98e-01 89.8% 97.8%
3380603 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.83 64.0 6.68e-01 85.7% 91.1%
3935864 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.83 68.0 3.82e-01 89.8% 17.3%
3812507 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 67.0 5.41e-01 89.8% 69.9%
3189161 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.83 68.0 3.90e-01 89.8% 32.3%
3747527 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 61.0 6.11e-01 83.7% 78.0%
3993760 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 56.0 6.21e-01 71.4% 100.0%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 65.0 5.34e-01 85.7% 75.3%
3550264 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 62.0 6.70e-01 85.7% 100.0%
4073598 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 64.0 5.80e-01 85.7% 67.7%
3660387 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.81 67.0 3.99e-01 91.8% 25.4%
3876177 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 64.0 5.49e-01 85.7% 56.0%
3939710 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 63.0 5.76e-01 85.7% 64.6%
3730967 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 65.0 5.06e-01 89.8% 70.5%
3730054 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 64.0 5.61e-01 85.7% 60.0%
3407033 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 66.0 5.75e-01 91.8% 92.0%
3731257 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 60.0 6.47e-01 85.7% 100.0%
3675534 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.80 66.0 5.59e-01 91.8% 87.5%
3515309 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.80 65.0 3.80e-01 89.8% 25.1%
3837286 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.80 70.0 5.74e-01 100.0% 78.9%
3446581 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 66.0 5.45e-01 91.8% 90.6%
4023099 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 64.0 4.86e-01 89.8% 79.1%
3223791 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 62.0 5.82e-01 85.7% 71.7%
3687689 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.79 65.0 3.93e-01 93.9% 18.8%
3194125 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 64.0 5.45e-01 89.8% 88.7%
4022899 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 65.0 5.14e-01 91.8% 76.0%
3527636 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 63.0 5.15e-01 87.8% 79.8%
3461050 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 61.0 6.15e-01 85.7% 84.0%
3843694 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 64.0 4.35e-01 91.8% 36.9%
3711287 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 64.0 4.98e-01 89.8% 58.7%
3224057 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 58.0 6.16e-01 85.7% 97.5%
3215203 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.78 57.0 6.11e-01 85.7% 97.5%
3311874 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.78 63.0 5.50e-01 89.8% 93.3%
3408565 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 61.0 6.29e-01 85.7% 100.0%
3524044 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 62.0 6.40e-01 85.7% 93.3%
3920713 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.78 65.0 3.79e-01 91.8% 21.3%
3184741 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 64.0 4.95e-01 91.8% 90.9%
4593317 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 61.0 5.75e-01 85.7% 71.7%
3724474 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.78 64.0 3.64e-01 89.8% 18.5%
3726578 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 64.0 5.37e-01 91.8% 83.5%
3668090 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.78 69.0 3.64e-01 98.0% 5.3%
3575456 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 61.0 5.06e-01 87.8% 85.6%
3628631 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 59.0 5.53e-01 83.7% 66.7%
3680688 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.78 64.0 3.70e-01 91.8% 14.1%
3456290 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 61.0 5.48e-01 87.8% 82.9%
3792735 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 62.0 3.63e-01 89.8% 20.1%
3665552 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.77 65.0 3.70e-01 93.9% 14.2%
3856479 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.77 65.0 3.78e-01 93.9% 16.4%
3866275 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.77 64.0 3.78e-01 93.9% 17.5%
3399970 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.77 68.0 4.30e-01 100.0% 29.2%
3470430 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 57.0 6.10e-01 83.7% 100.0%
3227830 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 57.0 6.09e-01 85.7% 100.0%
3613821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 62.0 5.55e-01 91.8% 90.0%
3230376 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.76 61.0 3.51e-01 89.8% 14.7%
3209791 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 59.0 5.42e-01 85.7% 70.8%
3355899 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 64.0 5.32e-01 93.9% 94.1%
3617852 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 65.0 5.75e-01 95.9% 95.7%
3617289 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 58.0 5.51e-01 85.7% 71.7%
3646821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 66.0 5.69e-01 98.0% 93.3%
3301272 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 66.0 5.03e-01 98.0% 63.6%
3726840 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 64.0 5.59e-01 95.9% 92.0%
3346715 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 61.0 5.33e-01 91.8% 94.7%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.75 66.0 5.62e-01 98.0% 94.9%
3817535 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.75 57.0 3.46e-01 85.7% 20.0%
3636704 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 64.0 4.87e-01 98.0% 95.7%
None — 0.74 66.0 3.76e-01 100.0% 13.3%
3218763 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 54.0 5.81e-01 79.6% 100.0%
3737703 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 57.0 5.73e-01 85.7% 84.0%
3300713 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 61.0 5.41e-01 95.9% 97.3%
3317266 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.73 59.0 3.49e-01 89.8% 17.3%
3837673 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 56.0 5.82e-01 85.7% 91.1%
3228948 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.73 55.0 5.90e-01 85.7% 100.0%
3220332 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.73 52.0 5.52e-01 77.6% 97.5%
3507975 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 63.0 3.82e-01 98.0% 24.8%
3490408 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 62.0 4.69e-01 98.0% 92.5%
3824399 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.73 57.0 3.47e-01 89.8% 28.8%
3688419 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.72 53.0 5.69e-01 85.7% 100.0%
3223353 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.71 53.0 5.60e-01 85.7% 100.0%
3226289 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.71 52.0 5.53e-01 85.7% 100.0%
3242169 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.71 53.0 5.60e-01 83.7% 100.0%
3243288 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.70 50.0 5.36e-01 77.6% 97.5%
3227162 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.70 52.0 5.49e-01 83.7% 100.0%
3216313 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.70 51.0 5.46e-01 79.6% 100.0%
3223932 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.70 52.0 5.49e-01 85.7% 100.0%
3235397 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.68 57.0 5.45e-01 98.0% 100.0%
3167678 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.68 55.0 3.04e-01 93.9% 9.0%
3244551 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.68 49.0 5.21e-01 79.6% 100.0%
3239033 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.67 52.0 5.19e-01 87.8% 92.0%
3174979 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 54.0 4.74e-01 98.0% 98.8%
D2 medium residues 106-209
PDB
D3 medium residues 210-287
PDB